Lactuca sativa (garden lettuce): 111905739
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Entry
111905739 CDS
T05352
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Q
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111905739
Spliceosome [BR:
lsv03041
]
Complex C
Other components
hnRNP proteins
111905739
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_10
BRAP2
RRM_YTH1
RRM_PARP14_3
RRM_RdRP1_2
RRM_5
RBD_DEAH11
CDC45
PHM7_cyt
Nop14
Motif
Other DBs
NCBI-GeneID:
111905739
NCBI-ProteinID:
XP_052624639
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All DBs
Position
2:216014239..216020619
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AA seq
514 aa
AA seq
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MPRTTRARAGAGAGGAASKAEESPKVVEKAASETEEQVDFEEEAVEEEVEYEEVEEEVEE
EEEEEVEEEEEVEEDEEEEEEEEEEEDADDEADRQKAGEDEEMENADADADEEKKYAELL
ALPPYGSEVYLGGIPLDVSEDDVKKFCESIGEVTEVRIMRGKDASENKGYAFVTFRTKEL
ASTAIKELNTKELKGKRVRCSTSQAKHKLFIGNVPKSWTLEDMEKVVRKVGPGINSVELL
KDPQNSRRNRGFAFIEYYNHACAEYSRQKMLNPKFKLDDNAPTVSWADPKNAESSASSQV
KAVYVKNLPKNVTQDELEKIFEHHGKIIKVVLPPAKAGHERSRFGFVHFADRSSVMKALK
NTEKYELDGQVLECSLAKPQADQKSSGGSSNNQNKAALLPNHHPPRVGYGGLVGGAYGGL
GAGYGAAAYGQPPLIYGRGPSTAGMAMMPMLLPDGRIGYVLQQPGMQPHSPQAMQQQPRG
GGGRSGGGGGSGGGHRRGNDSGGRGGGGRRYNPY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaccacccgggcaagggcaggggcaggggcaggtggggcagcttccaaggcc
gaggaatctccaaaggtagtggaaaaagcagcatctgaaacagaagagcaggtggacttt
gaagaggaggctgttgaagaggaggttgaatatgaggaagtagaggaagaagtggaggaa
gaagaagaggaagaggttgaagaagaagaagaagttgaggaagatgaagaagaagaagaa
gaggaggaggaggaggaagatgctgatgatgaagcagacagacagaaagcgggggaggat
gaagaaatggagaatgctgatgctgatgctgatgaagagaaaaagtatgcagaacttctt
gcccttcctccttatggttcagaagtatatcttggtggaattcctctagatgtttccgaa
gatgatgtcaaaaagttttgtgaatccattggagaagtcacagaggtgcggataatgagg
ggcaaagatgcatccgagaataaggggtatgcttttgtgaccttcaggaccaaggagttg
gcttctactgccatcaaggagcttaatactaaggagttgaagggtaaaagggtgaggtgt
tccacatctcaagcaaaacataagttatttattggtaatgttcctaaaagttggacattg
gaagacatggaaaaagttgtgagaaaggttggaccagggatcaattctgttgagctgcta
aaggatccacaaaactctaggaggaaccgtggatttgctttcattgagtattataaccat
gcatgtgcagagtattcgagacaaaaaatgctgaaccctaaatttaaacttgatgataat
gctccaactgtcagctgggctgaccccaaaaatgcagagtcttcagcttcttctcaggtg
aaggcagtgtatgtgaagaatctaccaaagaatgtgactcaagatgagttagaaaagata
ttcgagcaccatggaaagatcataaaagtggttctccctcctgcaaaagcaggccacgag
aggagtaggtttggttttgttcattttgcagatagatcaagtgtcatgaaggctcttaag
aacaccgagaagtatgagttagatggtcaagtattggagtgctcacttgctaagccacaa
gcagaccagaaatcatctggaggatcttcaaacaaccagaataaggcggctctacttcca
aaccaccaccctcctcgtgttggttatggcggcttggtaggtggtgcatatggtggtttg
ggtgcaggatatggggcagccgcctatggacagccgccacttatatacggaaggggacct
tcaacagctggtatggccatgatgccaatgcttttgcctgacggaaggattggatacgtc
ctgcaacaaccaggtatgcagccacactcaccacaggccatgcaacaacagccaagaggt
ggtggtggccggagtggtggaggaggcggctcaggtggtggtcataggcggggtaatgac
agtggaggtcgaggaggtggaggacgacgctacaacccgtattag
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