Lactuca sativa (garden lettuce): 111905827
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Entry
111905827 CDS
T05352
Name
(RefSeq) tRNase Z TRZ1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111905827
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
111905827
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
111905827
Prokaryotic type
111905827
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
111905827
NCBI-ProteinID:
XP_023757315
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All DBs
Position
4:196052580..196055839
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AA seq
341 aa
AA seq
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MSEPHVLSRLPLLRFLFRLRNLRRLRLRDIGVSLLQSEVKQEHQSFSLSLFSRIFSLIIM
ETKKKQGLNIEGYPIEGLSIAGHETCIILPSFNLAFDIGKCPQRAISQQFLFISHGHMDH
IGGLPMYVATRGLYRMAPPTIIIPKVIKENVEKIFEAHRAMDQSELKHTLIGLDIGEEFY
LRKDLKVKAFKTCHVIPSQGYIVYSVKQKLKPEYVGLQGEEIKKLKFSGVEITNTTTSPE
VAFTGDTTSDFILDPHNLDALKAKILIMESTYVENTMSVENARDYGHTHLSEIISHAERF
ENKAIVLIHFSARYHLDVIEKAVAALRAPLAGRVFALTEGF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccccatgtactctctcgccttcccttactccgttttctttttcgtcttcgt
aatctccggcgtctccgcctccgcgatataggtgtaagcttattacaatcagaagtgaaa
caagagcaccaaagcttttcattgtcccttttctccagaatcttcagtttgataataatg
gaaacaaagaagaaacaaggtttaaatattgaaggatacccaattgaaggtttatcaata
gctggacatgaaacttgtataattctccctagttttaatttagcctttgatattggaaaa
tgccctcaaagagccatttctcaacaattcctcttcatctctcatggtcacatggatcac
attggaggattgcctatgtatgttgcaactcgtggtttatacagaatggctccacctaca
attattataccaaaagtcattaaagaaaatgttgaaaagatctttgaagcacatagggcc
atggatcaatcagaattgaagcatacattgattggattagatattggggaagagttctac
ttgagaaaagatttgaaagtaaaagcatttaagacatgccatgtcatcccaagtcagggt
tatatagtttattctgtgaaacaaaagcttaaacctgaatatgttggacttcaaggggaa
gaaatcaagaaattgaagttctcaggtgtggagataacaaatacaacaacatcacctgaa
gtagcttttacaggggatactacatccgacttcatacttgatcctcacaatcttgatgca
ttaaaagcaaagattctcattatggagagtacttatgtggagaatacaatgtcagtggag
aatgcaagagactatggacacacacatttatctgagataatcagtcatgctgaaagattt
gagaacaaagcaattgtattgatccacttttcagctcggtatcacttggatgtgattgaa
aaagctgttgctgcattgcgagcaccattggcagggcgtgtttttgcactaacggagggc
ttctag
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