KEGG   Lactuca sativa (garden lettuce): 111906008
Entry
111906008         CDS       T05352                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03030  DNA replication
lsv03410  Base excision repair
lsv03420  Nucleotide excision repair
lsv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111906008
   03410 Base excision repair
    111906008
   03420 Nucleotide excision repair
    111906008
   03430 Mismatch repair
    111906008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsv03032]
    111906008
   03036 Chromosome and associated proteins [BR:lsv03036]
    111906008
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111906008
DNA replication proteins [BR:lsv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111906008
  DNA Replication Termination Factors
   ELG1-RFC complex
    111906008
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111906008
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111906008
  Check point factors
   HRAD17(Rad24)-RFC complex
    111906008
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid RsgA_GTPase
Other DBs
NCBI-GeneID: 111906008
NCBI-ProteinID: XP_023757516
LinkDB
Position
7:14055880..14059924
AA seq 636 aa
MKSPHVSPEPPKFLPDDLSNASQNSSSRSSKFAWPGKVPHFMKQKKTSTLTRESLQVLAA
VEDKKYYSSPYYKGLLNTEKVPGTSTSPEAENSTATATATGVPHEIQNWNLSSPYYKGLL
YTEKVPGTSTNPEVENIASGGSTHDLQSLDPSSPYYRGLLYRATSPDRESQTSSRTSFSV
RMSEWSASCFSFKTKDEKDPTMIKVYSTENSNEESLRERVSEPSLSPPTPAAMVVPPSSP
PLLPPAAKKMVVNAKDTSELKEEKYLWADRYRPVALKDFICNKDKAIELQHTINEDECRH
FIFEGQAGVGKRTMIWALLREAYGPDKVQARDECKTFNLKGEDVSSIMVNVKESSQHVEI
NLSELKGFEKHVIVELIKETNNLTNKTGLRCSNDNCRAIILHEADKLSTDALLYIRWVIE
RYRGCHKIFFCCQDASKLQPLKNICKLVQLLPPSNKEIVQVLEFIAKNEEIELPNKLAER
IAVSSKNNLRQAIRSFEATSQNNSLLEEDQVILTGWEDDIANIAKSIVEKQSPKQLYDIR
RKLQNLIDHSVPPEFIFETLAVELKKNVEESMHKQIEKTYKEYSGADKHRHANDERKKLI
HQFMCIEEFIAKFMSCYKNHLAKKAIDMTEIKEETT
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgaaaagcccccacgtctcccccgaaccccctaaatttttacctgacgacctctcaaat
gcgtcgcaaaactcctcttctcgttcctccaagttcgcttggcccggaaaagtccctcat
ttcatgaaacaaaaaaagacttcgaccttaacacgagaaagcctccaagtcttggccgct
gtagaagacaaaaagtattatagcagcccttattacaaagggctgctaaatactgaaaag
gtccccggtacaagtacaagtcccgaagcagagaatagcactgctactgctaccgctacc
ggtgtaccgcatgagatccaaaactggaacttgtctagcccttattataaagggctactg
tacacggaaaaagttccgggtacaagtacaaatccggaagtagagaatattgcttcaggt
ggatcaacacatgatcttcagagcttggacccttcaagcccttattacagagggctcctg
taccgggctactagcccggatcgggagagtcaaacgagttcaagaacgagtttttcggtt
aggatgtcggaatggagtgcatcttgtttttcttttaagacaaaagatgagaaagatccg
acaatgataaaagtttactctaccgaaaattcgaatgaggagtccttgagggagagagta
tcagagccgtcgttatcgccacctacaccagcggctatggtggtgccaccatcatcgcca
ccgttgctgccgccggccgccaaaaagatggttgtgaatgcaaaagatacgagtgagttg
aaggaggagaagtatttatgggcggatagataccggccggtagctctcaaggattttatt
tgcaataaggacaaagccattgagttgcaacatacgataaatgaagatgagtgtcgccac
tttatatttgaaggacaagcgggtgttgggaaaaggacaatgatatgggctttgcttcgc
gaagcatatggacccgataaagtgcaggcacgagatgaatgcaaaacgtttaacttgaag
ggggaagacgtaagcagtattatggtgaatgtgaaggaatcgtctcaacatgtagaaata
aacctgtctgaactaaaaggatttgagaagcatgtcatcgttgaactcatcaaagagaca
aataacttaaccaacaaaacggggctacgatgcagcaatgataactgtagagccatcatt
ttgcatgaagcagacaagctgtcaacggatgcattgctgtatataagatgggttatagag
cgatatagaggatgtcataaaatcttcttttgttgtcaagatgcttcaaagcttcaaccc
cttaaaaacatttgcaaattggtccaactccttccaccttctaataaagagattgttcaa
gtcctggagttcatagcaaaaaacgaagaaatagaattgccaaataaattggctgaaaga
atagcagttagttccaagaataacttgcgacaagctattcgctcctttgaagctacctca
caaaataattcgcttttggaggaagatcaagtaatcttgactgggtgggaagatgatatt
gcaaatattgccaaaagtatagtagaaaagcaaagccccaaacagctatatgacattcgt
cgaaaacttcaaaatctcatagatcatagtgtgccacctgagttcatctttgaaactcta
gcagttgaactgaagaagaatgttgaggagtcgatgcataagcagattgaaaagacatat
aaggaatatagcggagctgataaacatagacacgcaaatgatgaaaggaaaaagcttatc
catcaattcatgtgtatcgaagaattcatagcaaaattcatgagctgctacaaaaatcat
ctggctaagaaggcaatagacatgactgaaataaaagaagagacaacatga

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