Lactuca sativa (garden lettuce): 111906072
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Entry
111906072 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111906072
KO
K13210
far upstream element-binding protein
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111906072
03041 Spliceosome [BR:
lsv03041
]
111906072
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111906072
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111906072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
111906072
NCBI-ProteinID:
XP_023757573
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All DBs
Position
6:complement(18642815..18647060)
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AA seq
629 aa
AA seq
DB search
MAEEAQYSSGADYATTKRKYDDSTTPPPPSSTRRATGFSAPIIPSQSPDSAPAYNSVPPP
VDEIELAKQRAQEIAARIFSSAEAKRPKFDNGGGGGGYDSNDSKGFSSGPPDYGQKTYST
TAVSSAYGYGNPSKKIDIPNGRVGVIIGKGGETIKYLQMQSGAKIQVTRDMDSDPHSLTR
TVELTGTSESIAKAEQLIKDVLAEAESGGSGIVSRRMPGESGGAEQFVMKVPNNKVGLII
GKGGETIKNMQASTGARIQVIPLHPPPGDTSTERTVQIDGSSEQIEAAKQLVNEVISENR
PRNSMGSGGGGYSQQGYQARPQTNTWAPPAPQMQQQGYGYMQPGAYPGQPAQYSQPQYGG
YPRSGGYAAGWDQSGQQTAPGAAAAGGAGGGYDYYNQQQAPQTQPPGGTVAAADGSGYGY
SQQGQGYGQDGYGGYSQSGYAQGYDQQGYGNPAAGYNETSDGQTGSYGGQGDTTAAQAPP
PASGAQSGYVQPPPPAAASYGSYGAQPPSGYGGYGQKPPVTPPAYGQPPPQQSPNAAPQG
GGYAQPASYSGYGQADASGQRPPYGGAAAGYGQAAYGQQPAAAAYGGSYGGGYPQQPPAY
AGDAAAPATQASQGSSGGGAVAKASPQQS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaagcacagtattcgtccggagcggactacgccaccacgaaacgcaagtat
gatgactcaactacaccacctccgccttcatccacccgtcgagccactggattttccgct
cccataatcccttcacagtctcccgactccgccccggcttacaacagcgtacctccaccc
gtagatgagatcgagctggctaaacagagagcacaggagatcgctgctcgtatcttcagc
agcgccgaggccaaacgcccgaagttcgataatggcggaggcggcggcggatatgattcc
aatgatagcaaggggttcagctccggtcctccggattatggacaaaagacttattcgaca
actgctgtatcttccgcttatggttatggcaacccaagtaaaaagatcgacatcccaaat
ggaagggtaggtgtgataattggtaaaggtggagagactataaaatatcttcagatgcaa
tctggagcaaagatccaagttaccagagacatggattcagatcctcattcactcacccga
actgtagagctaacaggtacttcagaatcaatagcaaaggctgagcagttgattaaggat
gtgcttgctgaggccgagtcaggaggttctggcatagtttctagaagaatgcctggtgag
tcgggtggtgctgaacaatttgtgatgaaagtacctaacaacaaggttggtcttattatt
ggtaaagggggggagaccataaagaatatgcaagctagtacaggagctcgtattcaggtg
ataccactacacccaccccctggtgatacttcaacagagaggacagtacagatagatgga
tccagtgaacagattgaggctgcaaaacagttggttaatgaagtaatcagtgagaatcgt
ccgagaaactcaatgggaagcggtggaggaggatattcacagcaaggctaccaagctcga
ccccagacaaacacctgggccccacccgcaccccaaatgcaacaacaaggctatggttac
atgcaaccaggtgcataccccggtcagcccgctcaatactcccaacctcaatacggcggc
taccctcgttcaggcggatacgccgccggctgggaccagtccggtcagcaaacagcacca
ggagctgctgctgctggtggtgctggtggtggttatgattactacaaccagcaacaagct
ccccaaacccaacctcctggcggcaccgtggctgcagcagacgggtctggttacgggtac
agtcagcaaggtcaaggttacggtcaagatgggtatggtgggtactcgcaatctggttat
gcacaaggatacgatcaacaaggctatggtaatccggcagctggatataatgagacctct
gatggtcaaactggttcatatggtggacaaggtgataccactgctgctcaagctccacca
cctgcatctggagctcaatctggttatgttcagcctccgccgcctgctgctgcttcatat
ggttcctacggggctcagccgccttctggatatggtggatatggacagaagcctcctgtt
actccaccagcttacgggcagccgccgccacagcagtctcctaatgctgccccacaaggt
ggtggctatgcccaaccagcttcttatagtggttatgggcaggcggatgcaagcggtcaa
cgtcctccttatggtggtgctgctgctgggtatggacaagcagcatatgggcagcagcca
gcagcagcagcatatggaggatcgtatggcggtggttacccccagcaacctcctgcatat
gccggcgatgcagctgctccggcaacccaagcaagtcagggtagcagtggtggtggtgcg
gttgctaaagcttcacctcagcaaagttga
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