Lactuca sativa (garden lettuce): 111906141
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Entry
111906141 CDS
T05352
Name
(RefSeq) light-mediated development protein DET1
KO
K10571
de-etiolated-1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111906141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111906141
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111906141
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
111906141
NCBI-ProteinID:
XP_023757639
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All DBs
Position
5:208097293..208103135
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AA seq
536 aa
AA seq
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MFRSNNLTARIFERQIRTPSPGTTIHRARRFYENIVPGSTIYDVECPDHSFRKFTEDGKY
LISFSRNHQDLIVYRPTWLTFSCKQEDCYAQDLPPKAKKFESFFTQIYSVPLASASELIC
KDFFLYAESNQFGLFATSTAQIYDAPATGGAIQGVPSIEKITFHLLRLEDGVVLDERVFC
NDYINLAHSMGVFLYDDLLAIVSLRYQHIHILQIRDSGTLVDVRAIGDFCREDDQLFLNS
SSQGMSSIEKSVSQHIPVNNVANGPHLEQVPQENPFLSGIKQRLLSFIVREIRNEEEDET
MRIQSLKKKFYFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGAVSRNADNHPAFFAVYNM
ESTEIIAFYQMSSDKLYLLFEQFCDHFHVASKNSPYMNFISSHSNNIHALEQLRSSKNKA
TSFSLFVKKVMASLPFNCQSQSPSPYFDQSLFRFDEKLISAADRHRQSTDHPIKFILRRP
PHTLKFKIKPGPEAGITDCRTRRISSFLFHPILPLALSVQQSLFLQPAFVNIHFRK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaagcaacaatttaacagcaaggatatttgagcgtcagattcgaactccttct
cctggtaccactattcaccgtgcgaggagattttatgagaatatagttcccggttctaca
atatatgatgttgaatgtccggaccattcatttcgcaagttcacagaagatggcaaatac
ttaataagtttcagtagaaaccatcaagatttaattgtgtatcgacccacatggcttaca
ttttcttgcaaacaagaagattgttatgctcaagatcttccaccaaaagccaagaagttt
gagagtttcttcactcaaatctactcggtcccacttgcttctgcaagtgagctcatatgt
aaagacttctttctttatgcagagtctaaccaatttggtctttttgcaacttccactgct
caaatttatgatgccccagctaccggaggtgctattcaaggggttccttcaattgaaaaa
ataacattccatcttctaagattggaagatggagttgtacttgatgagagggttttctgc
aatgattacataaatttagcacacagcatgggtgtttttttatatgatgatttacttgct
atagtatctcttcgttatcaacatattcacatacttcagattagggattcagggactctt
gttgatgtaagagcaattggtgacttttgtcgtgaagatgatcagctttttctcaattct
agttcacagggtatgtcaagtattgaaaaaagtgtatcacaacacatacctgttaataat
gttgcaaatggccctcatcttgaacaagttcctcaagaaaatcctttcttgagtggcata
aaacaaaggctactttctttcattgttagagagatacgaaatgaagaagaagatgaaact
atgagaatccaatccctaaagaagaagttttattttcactttcaagattatgtcgatttg
attatatggaaggtgcaatttttggatcgacatcacttactaataaagtttgggagtgtt
gatggagcagtgtcaagaaatgctgataatcaccctgcattctttgctgtatataacatg
gaatcaacagaaattattgcattttatcagatgtcctcagataagctgtatttgttgttt
gaacaattttgtgatcattttcatgttgcatcaaaaaattccccttatatgaattttata
tcatctcattccaacaacattcatgctcttgagcaattgagaagcagtaaaaataaagcc
accagcttctccttgtttgttaaaaaagtgatggcttctttaccatttaattgtcaatct
caaagtccttcaccttattttgatcaatcattatttagattcgatgaaaagcttatttct
gcagctgatagacatagacaatcaactgatcatccaatcaaatttatcttaaggaggcct
ccacataccctaaagttcaaaataaaaccaggacctgaagctggaattacagattgtagg
acaaggaggatatcttcatttctttttcatccaattttacccctggctctttcagttcaa
cagtctttgtttttgcaacctgcttttgtaaatattcatttccgtaaataa
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