Lactuca sativa (garden lettuce): 111906266
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Entry
111906266 CDS
T05352
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111906266
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111906266
Enzymes [BR:
lsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111906266
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111906266
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
111906266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111906266
NCBI-ProteinID:
XP_023757795
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All DBs
Position
4:complement(5043121..5048368)
Genome browser
AA seq
1047 aa
AA seq
DB search
MDNSDSDSGGSHISSTPPRQPYQPPLHRRPPPQAPHTLLFSGNQQKNPKSKTKSGFSRPI
LRIKPSTKKTKLPPSKSTLKTDGTDPIQSPAPSAMRTPDVDPPLQTRRSSGGDSLDTIAP
TETLSAELPSNIHGSSGCPSSDTIGPIEILPAELPFKIHRSSGCDSFATIRQGENLLARS
SRFASIYKNRKLCLNLESTEKGIDHGLEAKIGVSDSQFGDATVIDSETIVKERPNLIGSY
TSRLEHPNTPDPTCVNETLGRDVNARDSGKVVKKHPNLIPSGVYPKEQVSKPKLVNEGNF
VRLNINGHGGRKKYANRIRKKNPNAYNSSRKTYKRIKRKRKGGGEGEEEQSFCEEEGFPL
EEDEETETRLDSEVIEQAVLNVRHDPSDENLIKLLKLTYGYDSFRVGQLETIRFILSGKS
SMVILPTGAGKSLCYQLPAMVLQGMTLVISPLVSLMFDQLKQLPPVIPGGLLCSSQTLEE
SAQTLRRVQEGALKVLFVSPERLLNAEFTSIFSTTSLISLVVIDEAHCISEWSHNFRPSY
MRLRASILRYSLGVNCILAMTATATTKTMHDVMHSLEIPPTNLVQTEQTRDNLQLSVSLS
ENRMKDLMTLLKASPYTEVKSIIIYCKYQWETDTISKVLCDNNIRAKSYHSGIPAKDRRR
AQEQFCLNKIRVIVATVAFGMGLDKSDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSHCH
LFFDDTTYFKLRSLMYSDGVDEYTVNKFLSQVFIGDSHSHSHSHSKGRICSIVKESASRK
FDMKEEVILTILTRLELAEEQYLGLLPQASVTCVVNFHMTSPALLAAKDTVINAILKKSE
IKDGQYVFDIPTVASSIGVQASTISNQLHIFKAKGEITYELKDPAYCYTILNFPKDICSL
ATDLAEWLSEVESCKVHKIDAMFNAAVFAVKTCDRRNGCSNSQHTACLQKKLLDYFNADN
DNNIPNKMGQASRFLKADIKVFIQSNSHTKFTPRAIARIMHGIASPSFPSSTWSKTHFWG
RYIETNFNVIMEAAKAQLIDAAGKSAV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggataactctgattcagactccggtggatctcacatctcctcaacgcctcctcgtcaa
ccatatcagcctcctctccatcgccgaccgccaccgcaggcaccacatactcttctcttt
tctggtaaccaacaaaaaaaccccaaatcgaaaaccaaatccggtttctcccggccaatt
ttgagaattaaaccatccaccaagaagactaagctcccgccttcgaaatctacacttaaa
actgatggaactgacccgattcaaagccccgctccatccgctatgcgtactcctgatgtt
gacccaccgcttcagacccgccgctcctccggtggtgattcgttggatactattgctccg
actgagactctttcagctgagctaccatctaacattcacgggtcctccggttgtccttcg
tcggatactattggtcccattgagattcttccagctgaactaccgtttaaaattcaccgg
tcatccggttgtgattcgtttgctactattcgtcagggtgagaatcttctagctcgtagc
tcacgcttcgcgtcaatttataagaaccgtaagctttgcttgaacttagaatcaaccgaa
aaaggaattgatcatggtttggaagccaaaatcggagttagtgacagccaattcggagat
gctactgtcatagactcggaaacaattgtgaaggagcgtccgaatttgattgggagttat
acttctcgattggaacatccgaatacgcccgaccctacgtgtgtaaatgaaaccctaggt
cgagatgttaatgctagagattcagggaaagttgtgaagaagcatcctaacttgattccg
agcggtgtttaccccaaggagcaggtgagcaagcctaaacttgtaaatgaagggaacttt
gtgagattgaacatcaatggtcatggaggacgcaagaagtatgcaaacagaattagaaaa
aagaatccaaatgcttataattcgagtcgcaagacttacaagagaatcaaacgaaaacgg
aaaggtggaggtgaaggagaagaggagcagagtttctgtgaagaagaaggttttccattg
gaggaagatgaagagactgaaacgagacttgattcagaagtgattgagcaggctgtgctg
aatgttcgacatgatccatctgatgagaatctaatcaagctgttgaagcttacttatggg
tatgattcttttagggttgggcaattggaaactattagatttatactttctgggaaatca
agtatggtgattttgccaactggagctggaaagtcactgtgttatcagttgcctgctatg
gttctacagggaatgacacttgtcattagtccattggtgtcacttatgttcgatcaactc
aaacagctcccaccagtgattccaggtggtttattatgtagcagtcagacactagaagag
agtgcacaaacacttaggcgggttcaagaaggagccttgaaggtcctttttgtttctcca
gagagattactaaatgcagaatttacatccatattttctacaacttcactcatctcactt
gttgtgattgatgaagcccactgtatttctgaatggtcacataatttccggccttcatat
atgaggcttagagcatccatacttcgttatagtcttggagtaaactgcattcttgcaatg
acagcaactgcaactaccaaaaccatgcatgatgtgatgcactcccttgagattcctcct
acaaatcttgttcaaacagaacaaaccagggacaacttgcagctgtctgtatcattgagt
gaaaataggatgaaggatcttatgacattgctcaaggcttcaccttacacagaggttaaa
agcattataatttactgcaaatatcagtgggaaacagatacaatcagcaaggttttatgt
gataacaatatccgggcaaagagttatcatagtgggatccctgctaaagaccgaaggcgt
gcacaagagcagttctgtttaaacaagatacgtgtgattgttgcaactgtggcctttgga
atggggcttgataaaagtgacgttggtgctgtaattcactacagtttgcctgaaagcttg
gaagaatacgttcaggaaattggacgtgctggacgtgatgggcgattatctcattgtcat
ctcttttttgatgacacaacatactttaagctaaggagtctcatgtacagtgatggagta
gatgaatacacagtaaataagttcctctctcaagttttcatcggggattcacattcacat
tcacattcacattcaaaaggaaggatttgctcaatagtcaaggaatcagcatctcggaaa
tttgacatgaaagaagaggtgattctgactatcttaactcgcttggagttagctgaagag
cagtacttgggtttacttccccaagcaagtgtcacatgtgttgtaaattttcatatgaca
tctccagcattgcttgctgctaaggacactgtgatcaatgcaattttgaaaaagtctgaa
ataaaagatggacaatatgtgtttgacataccaactgtggcatctagcattggagttcaa
gcttctaccatttctaatcagttgcacattttcaaggccaagggagaaatcacatatgaa
ctcaaggatccagcttattgttacacaatcttaaatttcccaaaagatatatgttccttg
gcaacagatctggctgaatggttatcagaagtcgagagttgcaaggtgcataaaatagac
gcgatgtttaatgctgcagtctttgcagtgaaaacgtgtgatagaagaaacggttgcagt
aattcccaacacacggcatgtttacaaaaaaagctcttggattacttcaatgcagataat
gacaataatatcccaaataaaatgggccaagccagccggtttttaaaagcagatatcaag
gtgtttatacagagcaactcacacaccaaatttacccctcgtgccattgctaggataatg
catggtatagcaagtccatcgtttccttcttcaacttggtctaaaactcatttctggggg
agatatattgaaacaaactttaatgttataatggaagcggcaaaagcacaactgattgat
gctgcaggaaaatctgccgtttaa
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