KEGG   Lactuca sativa (garden lettuce): 111906372
Entry
111906372         CDS       T05352                                 
Name
(RefSeq) protein SPA1-RELATED 2 isoform X1
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    111906372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111906372
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    111906372
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EIPR1 EIF3I WDR55 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Pkinase ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd WD40_like Beta-prop_WDR75_1st YNR034W-A-like
Other DBs
NCBI-GeneID: 111906372
NCBI-ProteinID: XP_023757898
LinkDB
Position
3:316551931..316558154
AA seq 889 aa
MYNVDFSDLKKNYMVRYFLRYFETVFCVLEYRAFTIALILDQKQLIQKCNQRNCYRPLHF
TGIFFSSFSSINKGMKASPEVTDSLQGHAESSSQTNTRPLGTSDIGHFGVETNVTNYDLM
NPNIATTSGTRDIRHCLSSMPLNPESVKARFNNEQENEDLPKEQPSDQLMDSNINKRLKV
SSSMNFSNFLFRQSRKGKGFLCKSSEISNEPNVAEMTNNKGFMGRMSSNGSLKLSEMTLD
FPQESAYKGMNLRKWLKLNSIQVNKAERLQIYRQVVQVVDMTHSQGNALQDLWLSNFSLL
PSNEIIYFDSSINYEVINSSQSNRKHIQQERESYSVTIELEKKWYASPEELYGMESLSAN
IYNLGVLLFELLSSFASLEMHSAAMLDLQYRILPPRFISQNPQESAFCLWLLHPHPSSRP
TTREILQSELLSGTKEFYSKNTYSPIIDKTEDSDFEILFNFLVLLKEQKEKHALELYKNI
QLLETDIKSFHHVYYDSKNIFETRMKTNMSHLESAYFSKRSQLQLCNSTTASNDRNDLDL
LGNHERCCDDFLKGVCKFIRYSKFEECGNLKIGNLLNSANVICSLSFDRDENYIAVAGVL
KKIKIFEFVSLLNDSVDDVNYPVVELVNDSKLSCVCWNKYLKNYLVSADYDGVLQVWDAF
IGQGLSHYIEHQRRAWCVDFSRVDPTQFASGSDDCSVKLWSLNDKKSTCTIRSAANVCCV
QFSPCSSHLLAFGSADYQIHCYDLRHVKIPWCTLAGHEKAVSYVKFLDSDSVVSASTDNT
VKLWDLKKTSLEGISTDACCMTYKGHTNEKNFAGLSVLDGYIACGSESNEVYAYHKSFPM
PITSYKFGTTDSISGGNNGEFVSSVCWREKSNMIVAANSGGHIKVLKML
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgtacaatgtagatttcagtgatttaaaaaagaactacatggtcagatattttcttaga
tattttgagacagtgttctgtgttcttgaatatcgtgctttcaccattgctttaattctc
gatcaaaaacagttgatccaaaaatgcaaccaaagaaattgctatcgtcctctgcatttt
acgggcattttcttttcttccttttcttccattaataaaggtatgaaagcttctccagag
gtcactgattcattacagggtcatgctgaaagttcaagtcaaactaatacaagacccctt
ggtacaagtgacattggacactttggtgttgagacaaatgtgacaaattatgacctcatg
aacccaaacattgcaaccacttcaggcacaagggatattaggcattgtttgtcaagcatg
cctttaaatcctgaaagtgttaaagctaggtttaataatgaacaagagaatgaagatctt
cctaaagaacaaccatctgaccagttaatggatagtaacatcaataagaggttaaaggta
tcaagctcaatgaacttctctaatttcctttttaggcaatctagaaagggaaaagggttt
ttgtgcaaaagttcagagatctctaatgagcccaatgttgcagaaatgaccaataataaa
ggtttcatgggcagaatgagttctaatggatcattaaagttaagtgaaatgactcttgat
ttccctcaagaaagtgcatacaaagggatgaacttgaggaagtggctaaaactcaattct
atacaagtgaataaagctgagaggctgcagatatatagacaggttgttcaggttgtcgat
atgacacactctcaaggaaatgcattgcaagatttatggctttcaaatttcagtttgttg
ccatcaaatgagatcatttattttgattcttcaataaattatgaagtaataaatagttct
caaagtaatagaaaacatattcaacaagagagagagtcatactctgtaactattgaactt
gaaaaaaaatggtatgcttctccagaggagctctatggaatggaatcattatcagcaaat
atctacaaccttggtgttctcttatttgagttactctcctcatttgcatcattagagatg
cattctgcagcaatgttagatttacaataccggatccttccaccacgtttcatttctcaa
aatccacaagaatctgccttctgtctttggctccttcatcctcacccttcatctcgccca
acaacaagggaaatcctacaatctgaattattaagtggaaccaaagaattttactccaag
aacacttattctccaattatagacaagaccgaagattccgattttgagattctatttaat
tttctagttttattaaaggaacaaaaggaaaaacacgcgttggagttatataaaaatatc
cagttgttagaaaccgatatcaagagttttcatcacgtgtattatgattcaaaaaatata
ttcgagacaagaatgaagacaaacatgagccatcttgaaagtgcttatttcagcaagagg
tcccaactccaactttgtaattctaccactgcctctaatgaccgaaatgacctcgacctg
ttagggaatcatgaaaggtgctgtgatgattttttaaagggtgtatgtaagtttataaga
tatagcaagtttgaggaatgtgggaatttaaaaatcgggaatcttttgaattctgcaaat
gtgatttgctctttgagctttgatcgtgatgagaactacattgctgttgctggtgtcttg
aagaaaataaagatttttgaatttgtttcgcttttaaatgattctgttgatgatgttaat
tatcctgttgttgagttggtgaatgattcaaagcttagctgtgtttgttggaacaagtac
ctcaagaattatttggtgtcagctgattatgatggtgtgcttcaggtgtgggatgcattc
attggtcaagggttatctcattatatagaacaccaaagaagggcatggtgtgttgatttt
tctcgtgtggaccccacacaatttgccagtggcagtgatgattgttcagtcaagttatgg
agcttaaacgataaaaaatcaacatgcacaatcagaagtgctgcgaatgtgtgctgtgta
caattctctccatgttcttcacatctattggcttttggatctgctgattaccagatacac
tgttatgatcttcgacatgtaaagattccatggtgcacgttagcaggacatgaaaaggct
gtaagctatgtgaagtttttggattccgattccgttgtttctgcatccactgataataca
gtgaagctttgggacctgaaaaaaaccagtttagaggggatttctactgatgcttgctgc
atgacctacaaaggtcacactaacgaaaagaactttgctggcttatctgttcttgatgga
tatatagcatgcggttctgaatccaatgaggtttatgcttatcataaaagtttcccaatg
ccaattacttcctacaagttcggaaccactgattccatttccggtggtaacaatggagag
tttgtttccagtgtttgctggagggaaaaatcaaatatgattgttgctgccaattcaggt
ggacatataaaggttctgaaaatgttgtga

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