Lactuca sativa (garden lettuce): 111906616
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Entry
111906616 CDS
T05352
Name
(RefSeq) 187-kDa microtubule-associated protein AIR9 isoform X1
KO
K28096
microtubule-associated protein AIR9
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsv04812
]
111906616
Cytoskeleton proteins [BR:
lsv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
111906616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IG_AIR9
PH_AIR9
LRR_4
LRR_8
LRR_9
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
111906616
NCBI-ProteinID:
XP_023758150
LinkDB
All DBs
Position
7:43692414..43701652
Genome browser
AA seq
1692 aa
AA seq
DB search
MEGEEGSLDKVPISVTKTQSSAESVKAARSVTKPTVSSSLKVSGSITGTTRKKIEPKGAS
NMVKSTTRKPTVDHGNTTSNSAPAIRRNSTGSLPEKQQQLPVKKQISSGGGSAVGRKISS
LTTTEPLRRSLPEAHKSSQPSSPIVRASRTMGSKSEASKGQSSLTSNVKSSPSLSSSSSS
RIPSTSIDSTASSTTRKSISKLSSSAVSSGSKSGSLSSSRERMSTSSSQRKAATPEIRIS
RLIMLPQVETKANDDVRLDLRGHRIRSLKAGMNMSPNLEFVYLRDNLLSSLEGIEILKRV
KVLDLSFNDFKGPGFEPLEACKALQQLYLAGNQITSLTSLPALPNLEFLSVAQNKLKSLS
MASQPRLQVLAASKNRVSTLKGFPCLPSLEHLRLEENPVLEMPHVEAASILLVGPTLKKF
NDRDLSHKEITFAKNYPPQTAVCIAKGWEFCPRDQALESTFHFLVEQWKDHFPPGYMLME
ASVDQPFEEDACFCHFLFTKDKINNDESELVLHYQWFIGSTPLSNFTPIPNATAEVYWPK
RDNVAKILKVECTPVLGDTKYPPIFAISSPVSPGTRCPKVLKLDVRGELVEGNIITGHPE
VAWCGGTPAKGISSWLRRRWNSSPVVISGAENEEYLLTLDDIGSCLVYMYTPVTEEGTKG
EPQYAITDYIKPAAPSVNNVQIIGDIVEGNAISGTGVYFGGKEGPSKFEWLRENKDTGDF
VLVLTGTTEYNLSKEDVGSRLAFVYHPVNFEGQEGKSTSALSPIVKRAPPKVTNLKIIGD
LREGSKITVTGNVTGATETSSRVQWFKTFSSILDGENGLEAVSTSKLAKAFRIPLGAVGC
YIVAKFTPVNTDGESGEPAYIISDRSVENLPPNLNFLSITGDYSEGGILTASYGYIGGHE
GKSIYNWYLHEVETEPGVVIPEASGRLQYNVTKDAIGKFISFTCTPLRDDGIIGESRTCM
GQERVQPGSPRLMSLQVVGTPVEGTTLSVNKQYWGGEEGESVFRWFRTSLDGMQSEVADA
ATSSYLLSLDDIGFSISVSCEPVRKDLARGPIVLSEQIGPISSGPPTCKSLEFRGSMVEG
GQLTFIASYSGGEKGACFFEWFRVKDNGSKEKLHSEADHLDLTLEEVGTCVELVYTPVRA
DGVKGSPKSTISSPISPGDPTGVKLVIPDCCEAQVVVPLKTYFGGQEGEGNYIWYRTRSK
LDALTLMDISENAGDDVATCGKTTIYTPSLEDVGAYLALYWVPTRSDGKSGEPLVSICNN
PVGPAFPEVSKVGVKALSLSSYSGEGEYFGGYEGESIFSWYRKTIEGTIVLIDGAHSKTY
QVSDSDYTCRLLFGYTPVRSDSVVGELKLSEPTDVILPEIPRIEMLALTGKAVEREVLTA
TEVIPKSDAQQNVWQKYKKHVRYQWYICSEENKSFEPLQSQCSCSYKLRFDDIGSRFKCE
CIVTDTFGRSSEPAYSETAPVSPGIPKIEKLEIEGRGFHTNLYAVRGNYSGGKEGKSKIQ
WLRSMVGSPDLISIPGETGRMYEANVDDVGYRLVAIYTPVREDGTEGCPVSASTEPITVE
PDVLKEVKQKLDLGSVKFEALCDKDRSSKKVSGVSSLERRILEVNRKRVKVVKPGSKTSF
PTTEIRGSYTPPFHVETFGNDQHRLKIVVDSENEVELMVQTRHMRDVIVLVIRGFAQRFN
STSLNSLLKLDA
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggaagagggatctttagacaaggtcccgatttctgtcacaaagacacagtct
tcagctgaaagtgtgaaagcagcaagaagtgttacaaaaccaactgtgtcgtcttctttg
aaagtctcaggttctattactggaactacccgaaagaagatagaacccaagggcgcttca
aacatggtcaaatcaactacaaggaaaccaaccgtagatcatggcaatactacttccaat
tccgcccctgccattcgaaggaatagcactgggagtttacctgaaaaacaacagcaactt
ccggttaagaaacagatcagtagtggtggtggttcagctgttggaaggaagattagttct
ttgaccacaaccgagccattgaggaggtctcttcctgaagcccataagagctcacaacct
tcttctcctattgttagagcttcaagaaccatgggcagtaaatctgaagcaagcaaggga
caatcttctcttacatctaatgttaaatcatctccatcactttcttcatcatcatcatca
agaattccttcaacatccatcgacagcactgcaagcagcacaaccaggaagtcaatttca
aagctctcatcatctgcagtttccagtggatcaaaatccgggtctctatcatcttcccgt
gaaagaatgtcaacttcatcaagtcaaaggaaagcagcaactcctgaaatcaggatatct
cgtttgatcatgcttccccaagttgagactaaagctaatgatgatgtgagattggatctt
aggggtcacagaatccgtagtctgaaagctggcatgaacatgtctcctaatttagagttt
gtttatctcagggacaaccttttatcttcattagaaggcattgaaatactgaagcgggtt
aaggttcttgatttgagctttaatgatttcaaagggccagggtttgaaccacttgaagcc
tgtaaagccttgcagcaactttaccttgctgggaatcaaatcacctcactgacatcactt
cctgcacttccaaatttggagtttctttcagttgcacaaaacaagttaaagtctctttca
atggcaagccagccacgattacaggtgttagctgccagcaagaatagagtatcaacacta
aagggttttccatgtctgccatcactagagcatttacggttggaggagaatcctgtactt
gaaatgccacatgtagaagcagcttctattttgcttgttggcccaactctgaaaaagttc
aatgacagagatctttctcataaagagattacattcgcgaaaaattatcctccgcaaaca
gcagtttgcatagcaaaaggttgggagttttgcccgagagatcaagccctagagtcaact
tttcattttctggtcgaacaatggaaagaccattttccacctgggtacatgctcatggaa
gcctcagttgatcaaccatttgaagaagatgcttgtttctgtcattttctttttaccaaa
gataaaataaataatgacgagtcagaattagttttgcattatcaatggttcattggatcc
acacctctttcaaacttcactccaattccaaatgctacagctgaggtgtactggccaaaa
cgtgataatgtggccaagattttgaaggtggagtgtactcctgtattaggagataccaaa
tatccccctatatttgctatatcttcaccagtctccccaggaaccagatgcccaaaggtt
ttgaagcttgatgtgcgtggagaactagtggagggaaacataattacaggccacccagag
gttgcatggtgtggtgggaccccagcaaaaggcatttctagttggttaaggagaagatgg
aatagtagtccagtggtgatttctggtgctgaaaatgaggagtatttattgactctggat
gacattggttcatgtctagtttatatgtacactcctgtaacagaagaaggaaccaaagga
gagcctcaatatgcaatcacagattatataaagcctgctgccccatcagttaacaatgtg
caaataattggagacattgtggaaggaaatgccattagtgggacaggtgtctactttgga
ggaaaagaaggaccaagcaagtttgaatggctgcgtgagaataaagatacaggagacttt
gtcctggtgctaactggaacaacagagtataatttgtccaaggaagatgttggttcccgt
ttggcttttgtatatcatcctgtgaactttgaaggccaggaaggaaaatccacttcagca
ctatctccaatagtcaaacgagctccaccaaaagtaacaaacttgaagataatcggtgat
ttaagggaaggaagtaagattacagtgactggtaatgtaactggagctacagaaacttct
agtagagtacaatggttcaaaacattttcctcaattcttgatggtgaaaatggtctagaa
gcagtaagcacatccaaattggccaaggcttttcgcatacccttaggagctgttggatgt
tacattgttgccaaatttacccctgtgaatacagatggtgaatctggtgaaccagcttac
attatatcggatcgatcagtggaaaatcttcccccgaatttaaatttcttatcaataacc
ggcgactactctgaaggtggaatactaacagcatcttacgggtacataggaggtcatgaa
ggaaagagtatttataattggtatcttcatgaggttgagactgagcctggtgtggtgata
cctgaggcttctggtcgccttcagtataatgtcacaaaagatgccattggtaaatttatc
tcctttacatgtactccattacgtgatgatggaattataggggagtcaagaacttgcatg
gggcaagagcgtgttcaaccaggaagccctagattgatgtcgttacaagtggttggaacc
ccagttgaaggcactacattatctgttaacaaacaatactggggtggtgaagaaggagaa
tctgtttttcgctggtttaggactagcttagatggtatgcaaagtgaagttgcagatgct
gccacgtcatcatacttgctttcacttgatgatattggtttttctatatcggtttcatgt
gaacctgtgagaaaggatttggcgcgtggtcctattgtattatctgaacaaattggacca
atatcttctgggccaccaacttgcaagtcacttgagtttcgtgggtcaatggttgaagga
ggacagttgaccttcattgcatcttatagcggaggggagaaaggagcttgcttcttcgaa
tggtttagagtgaaggataatggtagcaaggagaaactacattctgaagcagatcatttg
gatttgactctagaggaagtaggaacatgtgtggagcttgtttatacacctgtacgagca
gatggagttaaaggaagcccaaaaagtactatatctagtcctatttctcctggtgatcct
acaggtgtcaaacttgtaattcctgattgctgtgaggcccaagttgtggttcctttaaag
acatattttggtggacaagaaggtgaaggaaattacatctggtacagaactcggtcaaag
cttgatgcattgacactcatggatatatcagaaaatgctggtgatgacgtggcgacatgc
gggaaaacaacaatatacactccatcactcgaagatgtgggagcttatttggctttgtat
tgggtcccaactcgctcagatggaaaatccggggaaccgttggtgtccatttgcaacaat
ccagtgggtcccgcttttccggaagtttccaaagttggtgtaaaggcgttgtctttaagc
agttattctggtgaaggagagtattttggtggttatgaaggagaaagcatctttagttgg
tatagaaaaactatagagggaacaattgttttaatcgatggtgcccactcaaaaacttat
caagtttcagattcagattacacctgtcgattattattcgggtatacgcctgttcgtagc
gattcggttgttggtgagctgaagttgtccgagccaactgacgtaattctcccagagatt
ccaagaattgagatgcttgcgctcactggtaaggctgttgaaagggaagtattgactgcc
actgaagttatcccaaagagtgatgctcaacagaatgtatggcaaaagtacaagaaacat
gtcagataccaatggtacatttgttcagaagagaacaaatcctttgagccattacaatca
caatgttcttgttcgtataagctgcgatttgatgacattggtagtcgcttcaaatgtgag
tgcattgtaacagatacatttggaagatcgagtgaaccagcatattccgaaactgcccct
gtttcaccagggattcctaaaatagagaagctggaaattgaagggagaggtttccatact
aacttatatgcagttcgtggtaattatagtggaggaaaagagggtaagagtaaaatccag
tggcttagatcaatggttggaagtccagatcttatttctattccaggtgaaacaggaagg
atgtatgaagcaaatgtagatgatgtgggatacaggttggttgccatttatacccccgta
agagaagatggaactgagggatgtccagtttctgcttcaactgaaccaataactgttgaa
cctgatgttcttaaagaagtaaagcagaagcttgatcttggatctgtcaagtttgaggca
ttatgtgacaaggacagatcttcgaagaaggtttctggggtgagtagtcttgagagaaga
attttggaagttaataggaaaagagtgaaggttgtgaagcctggttccaagacttctttc
ccaacaactgagattcgtggaagctatacccctccattccatgtggagacttttgggaat
gaccaacataggctgaagattgttgtagacagtgagaatgaagtagaattaatggttcag
acacgacacatgagagatgtgattgtgttagttatcagaggctttgctcaacgattcaac
agtacttccctcaactccctcctcaagcttgatgcatga
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integrated database retrieval system
