Lactuca sativa (garden lettuce): 111906792
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Entry
111906792 CDS
T05352
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K14485
transport inhibitor response 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111906792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111906792
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111906792
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
111906792
NCBI-ProteinID:
XP_023758336
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All DBs
Position
7:complement(26171676..26174091)
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AA seq
575 aa
AA seq
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MDLAPTTPWTLPEEFLKRTFSLISSDKDRNSVSLVCKDWYNAERLTRRHVSIKNCYSISP
EIVAARFPAISSVTLKGKPRFSDFNLVPADWGADVQPWLNVFATAYPFLEELRLKRMVVT
DESLEFLALNFDGFKALSLLSCDGFSTLGLESIATHCENLTELDIQENSIIDLGGDWLSF
FPENLTTLQVLNFATLNSEVSFEALESLVSRCKSLKVLKVNRKVNLVQLQKLLLLAPQLT
ELGTGTFSDDLDPNPTLITDLANTFAKCQNLHSVSGFWDATLIYLPIIYPVCENLTFLNL
SYASLGADELEQILPRCKRLRRLWVLDTVGDKGLEAVGSYCPLLEELRVFPVFPVDPSQP
GVTESGLVSISHCPNLNYILYFCQRMTNEAVITTARNCPNFTHFRLCIITPYAPDSITNE
PMDEAFGAIVNSCSDLRRLSVSGLLTDLTFEYIGKHAKNLETLSVAFAGDSDLGMECVMR
GCPKLRRVEIRDCPFGDVALLSGLERYESMRSLWMSACNVTMEGCKKLAEELPRLNVEVI
NEEEDGGDDFVANKVYVYRSVAGPRKDAPPFVVTL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggatctagctccaaccacaccgtggacgctgccggaggaatttctgaaacgaacattt
tcgttgataagctccgacaaggatcgaaactcggtgtcgctagtctgcaaagactggtac
aacgctgagcgattgactcggcggcatgtatccataaaaaactgctactctatttcaccg
gaaatcgtagctgctaggtttccggcgatcagtagcgtgacgctgaagggaaaacctagg
ttttccgatttcaatctggtgccggcggactggggagctgatgtccaaccatggctaaat
gttttcgcgactgcgtatccttttctggaggagctgagactgaagagaatggtggtgact
gatgagagtttggagtttttagcgttgaattttgatggattcaaagccctatcactctta
agctgtgatggattcagtactcttggcctcgaatccattgctactcattgcgaaaaccta
acagaactcgacatacaagaaaattcaatcattgatctcggtggagactggctaagtttc
ttcccagaaaacttaaccacattacaagttcttaatttcgcaactttaaacagcgaagtc
agtttcgaagcattagagagtctcgtttctcgatgcaaatcgttaaaggtactaaaagtt
aaccggaaagtaaatttggttcaattgcaaaagcttcttctccttgctccacagttgacg
gagctcggcaccggtaccttctccgacgacctcgaccccaatcctactttaatcaccgac
cttgcaaacactttcgctaaatgtcaaaaccttcattcagtttctggtttttgggacgct
acgttgatttatctacccattatatatcctgtgtgtgaaaatttaacctttctgaatctg
agttatgcgagtcttggagctgatgaactcgaacagattcttcctcgctgcaaacgccta
cgtcgcctctgggttcttgatacagttggggacaagggtttggaagcagtcggatcatac
tgcccattactagaagaactccgagttttccctgtcttcccggttgacccgagtcaaccg
ggggtgaccgagtccggtctcgtatccatatctcactgcccgaacctcaattacatcctc
tacttttgccaacgaatgacaaacgaggccgtaatcaccactgcccgaaactgcccgaat
ttcacccacttccgtctttgcataataaccccctacgcacccgattccataaccaacgag
ccaatggacgaagccttcggtgcaatcgtcaattcctgttccgaccttcgccggctttcc
gtttccggccttctaaccgacttaactttcgagtacatcgggaaacacgcgaaaaacctc
gaaacactttcggtcgcgtttgcgggcgatagtgatttgggcatggaatgtgtgatgaga
ggctgcccgaagttgaggcgggtagagatacgggactgcccgtttggtgacgtggcgttg
ctttcggggttggaaaggtatgagtcgatgcggtctctgtggatgtcggcttgtaatgtg
acaatggaggggtgtaagaagttggcggaagagttgccgaggttgaatgttgaggtgatt
aatgaagaggaagatggtggtgatgattttgttgcgaataaggtttatgtttatcggagt
gttgcgggaccacgaaaagatgctcctccgtttgttgtaacattgtga
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