Lactuca sativa (garden lettuce): 111906862
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Entry
111906862 CDS
T05352
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 6
KO
K11843
ubiquitin carboxyl-terminal hydrolase 14 [EC:
3.4.19.12
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsv01002
]
111906862
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111906862
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111906862
Peptidases and inhibitors [BR:
lsv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111906862
Ubiquitin system [BR:
lsv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111906862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ubiquitin
Peptidase_C98
Motif
Other DBs
NCBI-GeneID:
111906862
NCBI-ProteinID:
XP_023758406
LinkDB
All DBs
Position
4:complement(170223167..170227525)
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AA seq
480 aa
AA seq
DB search
MPTVSVKWQKELYPAVEIDTTQPPYVFKCQLYDLTGVPPERQKIMMKGGLLKDDSDWSKL
GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEELAVAVGHSAGLFNLGNTCYMNSTMQ
CLHSVPELKSALIEYPQSGRSNDLDQSSHLLTVATRDLFSELDKNVKPVAPMQFWMVLRK
KYPQFGQQHNGSFMQQDAEECWTQILYTLSQALRSPGSSQSIDTVKGLFGIDLVSRVHCA
ESGEESLETESIYSLKCHISHEVNHLHEGLKHGLKSELEKASPSLGRSAVYLKDSRINGL
PKYLTIQFVRFFWKRESNQKAKILRKVDYPLELDIFDLCSDELRKKLEAPRQMLREEDGR
KAGLKLKEKTPPASADNDVKMSDAQGQSNESGESSKAASGEDKKKQLTGVYDLVAVLTHK
GRSADSGHYVAWVKQENGKWIQFDDDNPIPQREEDITKLSGGGDWHMAYICMYKARTIDI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagtgagtgtgaaatggcaaaaagagctatacccagcagtggagatagataca
acccagcctccatatgtttttaaatgtcagttgtatgacctcacaggggtaccacccgag
aggcaaaagataatgatgaaaggtggattactaaaggatgactctgattggtcaaaatta
ggggttaaagagggtcaaaagttaatgatgatgggaactgctgatgagattgtaaaggct
ccagagaagggccccgttttcatggaagaccttccggaagaagaactagcagttgctgtg
gggcattctgctggattattcaatctgggaaatacctgttacatgaattccaccatgcaa
tgtttgcattcggttccagagcttaaatctgctttgattgagtatccccaatctggcaga
agcaatgatttagatcaatcttctcatcttttgactgttgcaacacgagatttatttagt
gagcttgataaaaatgtcaagccagttgcacctatgcagttttggatggtattgcggaaa
aagtatcctcaatttggtcagcagcataatggatccttcatgcaacaggatgctgaagaa
tgctggacacagattttgtatactctatctcaagcccttagatctccaggttccagtcaa
agtatcgatacagtgaagggactttttggcattgaccttgttagcagggtgcattgtgct
gagagtggtgaagaaagtttagaaacagagtcaatttattctcttaaatgccacatatca
catgaagtcaatcatttgcatgaggggctgaaacatgggttgaaatcagagctagaaaag
gcttctccttctttgggtcgaagtgcagtttacttgaaggattcacgcattaatggatta
ccaaagtatttgactattcaatttgtgcgatttttctggaagagggaatctaatcagaaa
gcaaagattttgaggaaagtggattatccattggagttggatatttttgatctttgttca
gatgaacttcgcaaaaagctggaagctcctcgacagatgttaagagaggaagatggtaga
aaggctggtttgaaactcaaagaaaaaactcctcctgcttcagcagacaatgatgttaag
atgtctgatgcacagggacaatcaaatgaaagtggagaatcatctaaagctgcttctgga
gaagataagaaaaagcagttgacgggagtatatgatttggttgctgtgctgactcataaa
ggcagaagtgcagattcaggtcattatgttgcttgggtcaaacaagagaatgggaaatgg
atccaatttgatgatgataatccaatcccacaaagggaagaagatataacaaaactttct
ggaggaggtgattggcatatggcttacatttgcatgtacaaggctcgcaccattgacatt
tga
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