Lactuca sativa (garden lettuce): 111907113
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Entry
111907113 CDS
T05352
Name
(RefSeq) choline transporter protein 1
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111907113
04147 Exosome [BR:
lsv04147
]
111907113
Transporters [BR:
lsv02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
111907113
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
111907113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
Phage_holin_8
DUF6185
Motif
Other DBs
NCBI-GeneID:
111907113
NCBI-ProteinID:
XP_023758676
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Position
7:complement(190282241..190285847)
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AA seq
697 aa
AA seq
DB search
MRGPVIGKYPSSDGNGEVGAGNGIIKHNRKCRDIVFLVFFIAFWISMIVNSSFGFNQGNP
LRLNFGLDYKGNVCGGKHSDFDLRELELKYWVNPNQVYQSGMKNSGVKLSNARTICLLDC
PIPSEDSLNWVCDYPEGDIRLSLDDWIDMNYDYFADLTPELRNTSLQLQGPCYPVIFPSV
NVYWSCQFIDRPSNVSLTNWKRMNGVTINDDMIIDKSIHNSINARSSVLKRYVADVGKSW
PVLIVCGGLLPLFLSLLWLLMIRHFVTGMPWVTIFLFNGLIISVTMFYYMKAGWIGNDAI
SPIIGEHDPYYHVTSREQHHMRAAAFLMTCVMIISVLSSIAIVRRILMATSVLKVAAKVI
GEVHALIIFPVIPYLILAVFYMIWVSAALHLFSSGEIVRNDCSTNCCAYDLKAKRVSCDD
CCGYSIHYTNHIAASILFHLFGCYWATQFLIASSSTVIAGSVASYYWARGESSTTIPFLP
VFSSMKLLTRYSLGSIAIGSLIVSFIESTRFILEAIRRRLKVADIMPENFIKRMMFHTSR
FCLKGIELTIKSVNRNAYIMIAITGKGFFKASEIATNLIISNILRIGRVNVIGDVILFLG
KLCVSLASALFAFLMLDTHKYKSSHNKITSPLFPVMVCWGLGYVVATLFFGVVEMSIDTI
ILSYCQDAEEHQGTAHYAPPLLIETFEEDNEVQRIGQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaccggtgatcggaaagtacccatcaagcgacggaaatggtgaagtcggcgcc
ggaaacggaatcataaagcacaatcggaaatgcagagatattgtgtttcttgttttcttc
atagctttctggatctccatgattgttaactccagcttcggtttcaaccaaggaaaccca
ttaaggctaaatttcgggttggattataaaggaaatgtatgtggaggaaaacattccgat
tttgacctccgtgaattggaactcaaatattgggttaaccctaatcaagtttaccaaagt
ggcatgaagaacagcggggtaaaactgtcaaatgctcgaaccatatgcttattagactgt
ccaataccctcggaagattctttaaattgggtttgtgattatccagagggagatattcgt
ctttctttagatgattggatcgatatgaattatgattattttgccgatcttacccctgaa
cttagaaacacttctcttcaacttcaaggcccttgttaccctgtcatttttccaagcgta
aacgtttattggagttgccagtttattgatcgaccatcaaatgtttctttgactaattgg
aaacgaatgaatggagttacaatcaatgatgatatgatcatagataaatctattcataac
tccattaatgcacgatcttctgtattgaagagatatgtcgcggatgttggaaaatcatgg
cccgtgttgattgtttgtggaggacttttgcctttatttttatcgctattgtggctttta
atgatccgacattttgtgaccggaatgccctgggtgactatttttctctttaatggcctt
atcatatcagtcacaatgttctactacatgaaagctggatggattggaaacgatgcgatt
tcgcctatcattggcgaacatgatccatactatcatgtcacttcaagggagcaacatcat
atgcgagcagccgcttttctcatgacatgtgtcatgatcatatccgttttatcatcaatc
gccattgttcgccggattctcatggcaacatcagtactcaaggtggcagcaaaggtgatc
ggagaagttcacgcgttgataatttttccggtgatcccatacctaattctggcggtgttc
tacatgatctgggtgtcggccgccctccaccttttcagctccggcgagatagtccgcaat
gattgcagcacaaattgttgtgcatacgatttgaaagccaaaagggtgagttgcgatgat
tgttgtggatatagcattcattacaccaatcatattgcagcttcgattctcttccacttg
tttggatgctattgggccactcaatttctcatcgcctcttcttccactgtcattgctggc
tccgtggcttcttactattgggctcgtggagaatcatcgacaacgattccgtttcttccg
gttttctcatcgatgaagctactcacgcgatacagcctcggctcaatagcaatcggttcc
ttaattgtgtcttttatcgagtcgactcggttcatactcgaagccattcgaaggagactc
aaagtcgctgacatcatgcccgaaaacttcatcaaaagaatgatgttccacacttctcgt
ttttgcttaaagggcattgaattaaccataaaatcagtaaaccgaaacgcatacattatg
attgcaataacgggaaaaggattcttcaaagcttcagaaattgcaacaaatttgataata
agtaacattttgcggattggaagagtgaatgtgattggagatgttattttatttcttgga
aagctttgtgtgagtcttgctagtgcgcttttcgcgtttcttatgttggacactcataag
tacaaatcgtctcacaacaagatcacatccccgttatttcctgtaatggtgtgttgggga
ttagggtatgtggtggcgacattgttttttggggtggtggaaatgtcgatagatacgatt
attttatcgtattgtcaagatgcagaggaacatcaagggacagcacattatgcgcctcca
cttttgattgagacttttgaggaagataatgaggtgcaaaggattggacaatga
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