Lactuca sativa (garden lettuce): 111907283
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Entry
111907283 CDS
T05352
Symbol
LOC111907283
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111907283 (LOC111907283)
04121 Ubiquitin system [BR:
lsv04121
]
111907283 (LOC111907283)
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111907283 (LOC111907283)
Membrane trafficking [BR:
lsv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111907283 (LOC111907283)
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111907283 (LOC111907283)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
HypA
zf-RING_5
VPS18_RING_C
zf-HC5HC2H_2
Rad50_zn_hook
zf-HC5HC2H
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-GeneID:
111907283
NCBI-ProteinID:
XP_023758837
LinkDB
All DBs
Position
5:342897476..342899318
Genome browser
AA seq
385 aa
AA seq
DB search
MSRTTAASYWCYRCTRFVRVSAEDTLLCPHCEGGFVEAVEASEPPPLGTRRRFPATAMYM
LGNNDRSDLRSRRGARRNNGDRSPFNPVIVLRGPAEGNGAVEDSGVGERGFELYYDDGAG
SGLQPLPPTMSEFLMGSGFARLLDQLSQIEMNGLGRAGHPPASKAAIESMPTIEISEAHV
STESHCAVCKEAFVISAEAREMPCKHIYHSDCILPWLTLRNSCPVCRHELPTDSTDSNSS
NLERSEPTEEESSAVGLTIWRLPGGGFAVGRFSGGRRAGVGGGERELPVVYTEMDGGFNN
NSGTPRRIMWESRRNSAGGESGIGRAFRNMFSFFGRLRPSSNSTTNSGGASMARSRSLSS
SVFGRMTRRRSRTWILDEQNGMSRW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggacgacggcggcgtcttattggtgttaccgatgcacgcgcttcgtcagagta
tcggcggaagacacccttttatgtccacactgtgagggaggattcgtggaagccgtggaa
gccagcgagcctccaccgctgggtacacgccggcggtttcctgccacggcgatgtacatg
cttggaaacaacgatcgatcagatctacgctcacggcgtggtgctcggcgtaacaacgga
gataggtctcctttcaatccggtcatcgttcttcgtggtcctgcggaaggtaacggcgct
gtggaggattcgggggttggagagagaggttttgagttgtactacgacgacggagcaggt
tcgggtctacaaccgttgccgccgacgatgtcggagtttctgatggggtcagggtttgcc
cgattgctcgatcagttgtctcagatcgagatgaacgggttaggtcgggcaggacatcct
ccggcttcaaaagcagctattgaatcgatgccgacgatcgagatctcagaggcacacgtt
agcacggaatcacactgtgctgtttgcaaagaagcgttcgtgatcagcgctgaagctcgt
gagatgccatgtaaacacatctatcactccgattgtatcctcccatggcttactctccga
aactcgtgcccggtttgccggcacgaactcccaacggattcaacagattcaaattccagc
aatctagaacgctctgaaccaaccgaggaagaatcatcagcagttggattaacgatatgg
agattacctggtggcggatttgcagttgggaggttctctggcggtagaagagccggcgtc
ggcggcggtgagagggagcttcctgttgtatacacggaaatggacggtggatttaacaat
aattctggtactccaaggaggattatgtgggaatcaagaaggaacagtgcaggtggagaa
agtgggataggaagagctttccgcaacatgttctcgtttttcgggaggctacggccatct
tcaaattcaaccaccaattccggtggtgcatcaatggctagaagccggagtttgtccagt
tctgttttcggtagaatgaccaggagaagaagtagaacttggattttagacgaacagaat
ggtatgtccagatggtaa
DBGET
integrated database retrieval system
