KEGG   Lactuca sativa (garden lettuce): 111907385
Entry
111907385         CDS       T05352                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03420  Nucleotide excision repair
lsv03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    111907385
   03460 Fanconi anemia pathway
    111907385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsv03032]
    111907385
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111907385
DNA replication proteins [BR:lsv03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    111907385
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111907385
SSDB
Motif
Pfam: ERCC4 CARD
Other DBs
NCBI-GeneID: 111907385
NCBI-ProteinID: XP_023758925
LinkDB
Position
3:complement(21649991..21654443)
AA seq 956 aa
MVQFHEHIIADLLEEPTAGGGLVVISSGLALHKLIAGFLHLHDTSEGTLLILSASPSQKH
SILTSLNPNPNNEITNSPSEITSDLPSHHRLSLYSSGNAFFITSRILIVDLLTRRLPTSA
VAGIILLNAHSLSETCTEAFIVRILRSSNKNLYVRAFSDKPHAMVSGFAKAERTLKCLFL
RKLHLWPRFQVYVSEELERDPPEVVDIRVPMSAYMVGIQKAVIEVMDACLKEMRKTNKVD
VEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK
YLDSLRASESFRSVWIFAESSYKIFEYAKRRVYHFSRSKGEDLTTSAKNVKSKKRKLDDS
SNDKEDSPVTNGSSSVVLEEVLEEAPKWKVLREILEEIEAEREKQATSNDECVVEINQDN
NGMVLVACKDEHSCVQLEECITSNPNKVMRGEWEKYLVSKVQLQALPKRNKKKPQNPKGF
GVLDGAVPLTPTKGVESSSIATQEQNALLAAATEISKRVQKVIDVVDDPQSNVVHKGRGK
GNSKGKKKQPSKNVPLKKDDKSKLETSSVKECEPSIPVLKKHVEGVDVEKPDNLKKIPSV
HFYAYESGQQVLDILKPSAIVVYHPDIAFVREIEIYKAENPLKKVKVYFLFYEDSTEVQK
FEASIRRENGAFESLIRQKSMMMLPVDQVAHGLGQNTTTETESPSKQNMVTRKAGGQKEA
VKEMQVIVDMREFMSSLPNVLHQKGMHIIPVTLEVGDYILSPLICVERKSIQDLFGSFAS
GRLYHQVEMMVRYYQIPVLLIEFSQDKSFSFQSTSEITDDVTPHNIISKLSLLVLHFPRL
RIVWSRSLHATAEIFASLKANQDEPDEAKATRVGVPSEEGVVEDDIRAENYNTSAVEFLR
RLPGVTDANYRTIMDGCSSLADLALLPMERLAELMGGQKSAKILRDFLDAKYPTLL
NT seq 2871 nt   +upstreamnt  +downstreamnt
atggtccagtttcacgaacacataatcgccgatctccttgaagaacccaccgccggcggc
ggcctagtcgttatctcttccgggcttgctctccacaaacttattgccggttttctccac
ctgcacgacacttccgaaggcactcttctcatcctctctgcatccccttcccagaagcat
tcaatcctcacctccctaaaccctaaccctaacaacgaaatcaccaattctccgtccgag
atcacttctgacctcccctcacatcatcgcctttctctctactcctccggcaacgccttc
ttcatcacttctcgtatcctcatcgttgacctcctcactcgccgccttcctacatctgcc
gtggctgggatcatcctcctcaatgcacattctttatcagaaacttgtactgaggctttc
attgtcagaattcttaggtcgtcgaataagaatctttatgttcgtgcgttttcggataag
ccccacgctatggtctctggatttgccaaggccgagagaacactcaaatgcttgtttctc
aggaaactccatctgtggcccaggtttcaggtatatgtatcagaagaactagagagggat
ccaccagaagtagtggacatcagggtccccatgtctgcttacatggtgggtattcagaaa
gctgtgattgaggtcatggatgcttgtttgaaggagatgaggaagactaacaaggttgac
gtggaggatttgactgtggagaatggcttgttcaagtcatttgatgagattgtaaggcgg
caactagatccaatctggcatacattggggaagaagactaagcagcttgtctcagatttg
aaaaccttgcggaagttgcttgattatcttgttaggtatgatgcagtgacttatttaaag
tatttagattcattgagagcatcagagagttttcgttctgtatggatctttgcagaatcc
agttataagatctttgaatatgcgaaaagacgggtttatcactttagtaggtcaaagggt
gaagatttgaccacctcagccaagaatgtgaagtccaaaaagaggaagttggatgatagc
agcaatgataaagaagattctccggtgacaaatggcagtagtagtgtagttttggaggaa
gtcttggaggaggcaccaaagtggaaggtgttgcgtgagattcttgaagaaatagaagcc
gaaagggaaaagcaagccacatcaaatgatgaatgtgttgttgaaattaatcaagataat
aatggcatggttttggttgcatgtaaagacgaacactcgtgtgtgcaacttgaggagtgt
atcacaagcaaccctaataaggtcatgcgtggagagtgggagaagtatttggttagtaaa
gtacaattgcaagccttaccaaagcgcaataagaagaaaccccaaaaccctaaaggtttt
ggagtacttgatggagcagttcctttgacacccacaaagggagtagaaagcagtagcata
gcaacacaagaacaaaatgcccttttagcagcagcaaccgaaataagtaaaagagtccaa
aaagttattgacgtagtagatgatcctcaaagtaatgtggtccataaagggcgaggcaaa
gggaactcaaaaggcaagaaaaaacagccctcaaaaaatgttcccttaaagaaagatgat
aaaagtaaacttgagacatcatcagttaaagaatgtgagccctcaatcccagttttgaag
aagcatgttgaaggggttgatgttgagaaaccagacaatctaaaaaagattccttctgtt
cacttttatgcgtatgaaagtggtcagcaagttcttgacattttgaagccttctgctatt
gttgtttatcatcctgacattgcttttgtgcgagaaattgaaatatataaagccgaaaat
ccattaaagaaggtgaaagtttattttttattttatgaagattctacagaagtgcagaag
tttgaggccagtatacgccgtgaaaatggagcatttgaatccctgattagacagaaatcc
atgatgatgttgccagttgatcaggtggctcatggacttggtcagaataccaccacggag
acagaatctccatcaaaacaaaatatggtaactaggaaggcaggtggacagaaggaagct
gtgaaagagatgcaagtgatagtggatatgagggagttcatgagcagccttccaaatgta
cttcatcagaaaggcatgcatataataccagtgactctagaagttggagattacatttta
tcaccattgatttgtgtcgagagaaaaagcattcaagatcttttcggtagttttgcatcg
ggtcgcctttaccaccaagttgaaatgatggtccgttattaccaaatccccgttctttta
atcgagttttcacaagacaaaagcttctcatttcagtcaacaagtgagattacggatgat
gtgacgcctcataacataatatcaaagctatctttacttgttctacattttcctcgtttg
cggattgtgtggtctcgtagcttgcatgcaactgcagaaatttttgcttctcttaaggca
aatcaagatgaacccgatgaagccaaggcaactagagtcggtgtaccttcagaagaaggt
gttgtggaagatgacattcgggctgagaattacaatacatccgcggttgagtttctaagg
cggctaccaggggtgacggatgctaactacaggacaataatggacgggtgcagcagcttg
gcggatctggcactccttccaatggagagacttgctgaattaatgggaggccagaaatct
gccaagattcttagggacttccttgatgccaagtatcccaccttgttataa

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