Lactuca sativa (garden lettuce): 111907484
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Entry
111907484 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111907484
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111907484
03015 mRNA surveillance pathway
111907484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111907484
03041 Spliceosome [BR:
lsv03041
]
111907484
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111907484
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
111907484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
111907484
NCBI-ProteinID:
XP_023759047
LinkDB
All DBs
Position
9:29064302..29069398
Genome browser
AA seq
798 aa
AA seq
DB search
MSGGFFRGTTADQDTRFSNKHAKLLKSQKFPPELENLVDMTKVKMDVMRPWIAHRVTELL
GFEDEVLINFIYGLLEEKVVNGKEIQISLTGFMEKNTGKFMKELWTHLLSAQNNASGVPQ
QFLDAKEEETRKKQEDTDRITRELKRTKEKEGREREAEQERVKMDREVAAAATLEPHSRS
RTKDSSKWSTVDDKGTDDRNNGSKATPRITRSPHSPHHSLSPPRGTRSRSVSKSFSNSRS
HSRSRSLSASPKPPRRSVSSERRRRVDSRLHSPSPPPRPRGRSPSPARRRLRSPVRRRSR
SPMWRRSRSPIRRRSRTPIRRRSRSPIRRRSRSLLRRRSRSPLRRRSRSPLRRRSRSPIR
RRSRSPVRRRSRSPIRRRSPSPFQRRPRSPFRHGSQSSASPPPRQVSVSPSPVRRRSPSP
PVRRRYQRAPSIPRHRSPSPARRRPAFPTRQRSPPSPRSMSSSPSRQMSLSPRHATPLKS
FRGSPRRQQQRSPVQSPRDGHRGVQRSVVDRQAPRKETAPPPVAGRSLERDSKGRRTSHN
GGPALSSPQHSSPMGSVSPPPAARSPSVERSPILPRRQKETMDTKDCMDNVEVEERTFSR
VKEEKHAKNKNSPEKLTSHHRKSKNDDVRRKYPDEVTENPPRNRKDILAAEKGYKAGDDN
KEAAAAKLQKSGSLDSGGSDESDGGKRKRKRSKKKDVTSDDDDDDYSHHSHDDSHTEDKK
EAKKRRKEEKRLKKEERRKRREERRRRKAEKQKGRKASGNVSPSSDENEEDADQKKLEIE
LREKALESLRAKKGSIGH
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcggtttcttccggggtactacggccgatcaagacactcgtttctcaaacaag
catgctaagcttcttaaatcgcagaagtttccacctgaattggaaaatctggtggacatg
acaaaggttaagatggatgtcatgcgcccatggatagctcacagggtgactgaacttctt
ggatttgaagatgaagttctgatcaactttatttatggacttttagaggagaaggtagtt
aatggcaaagagattcaaatttcacttactgggtttatggagaaaaatacagggaaattt
atgaaggagctctggacacatcttctgagtgcccagaataatgccagtggtgtccctcaa
cagttcttggatgccaaggaggaagaaactcgaaagaagcaggaggatacggatcgtata
accagagaattgaagagaacaaaagagaaagaagggcgtgagcgggaggctgaacaagaa
agagtgaagatggacagagaggttgctgctgctgctacgttggagccccactcaaggagt
cgcactaaagattctagcaaatggtcaactgtagatgacaaagggacagatgataggaat
aatggctcaaaagcaacacccaggatcacccgctctccacattcacctcatcattctctc
tcaccacctcgaggtacacgttcaagatcagttagcaagtcattctctaattccagaagt
cattcaaggtccagaagcctgtcagcatctcctaaacctccaaggcgttcagtttcttct
gaaaggaggcgccgagttgactcacgtctgcattccccatcccctccaccacgtccacgt
ggacgctcaccttcacctgcaaggcgaaggctgcgatcccctgtgagacgcagatctcgg
tctcccatgtggcgcagatcacggtcacctataaggcgtaggtcccgcacacccatccgg
cgaaggtcccgctctcccatccgccggaggtcacgttctctcctccggcgaagatcacgt
tctcccctccggcgaaggtcccgctctccactccggcgaaggtcacgttctccgatcagg
cgcaggtcacgttctccggtcaggcgaaggtcgcgttctccgatccggcgaaggtctccg
tctccgtttcaacgcaggcctagatctcctttccgtcacgggtcacaatcctctgcgtct
cctccgccacgccaggtgtcagtgtctccttcaccggttcgtcggaggtccccatctcct
cctgtaaggcggcgataccagagagcaccgtcaattccacgtcatcggtctccttcgcca
gctaggcgtaggccagcttttcccacccgtcaaagatcccctccaagtcctcggagtatg
tcttcttctccatcaaggcagatgtctctttcccctagacatgctacacccctgaaaagt
ttcaggggatcaccaaggcgccaacaacagagatcacctgtacaatctcctagagatgga
cacagaggtgttcagagaagtgttgttgatcgtcaagctccacgaaaagagactgctcca
cctcctgttgcaggaaggtctttggaaagagattcaaagggcaggagaacttctcataat
ggagggccagctttgtcttcaccacaacatagctctcctatgggttctgtatctccccca
cctgctgccagaagtcctagtgtcgagaggagccctatacttccaaggagacagaaagaa
actatggataccaaggactgtatggataatgttgaggttgaagaaaggaccttttccaga
gtgaaggaagagaaacatgccaagaacaaaaattctcctgaaaagttaactagtcatcac
cgaaagagcaagaacgatgatgtaaggaggaaataccccgatgaagttacagagaatccc
ccacgaaaccgtaaggacattttagcagctgaaaaagggtataaagctggtgatgataat
aaggaagcagcagcagcaaagttgcaaaaaagtgggtcattggattctggtgggtcggat
gaaagtgatggtggaaagagaaaacgcaaaaggtcaaaaaagaaagacgtgacatcagat
gatgatgatgatgattatagccatcatagtcatgatgactctcacacagaagacaaaaag
gaagctaaaaaacgacgcaaagaggagaaacgattgaaaaaagaggaaaggcgcaaacga
cgtgaggaacgacgtcgcaggaaggcagaaaagcagaaaggcaggaaagcaagcgggaat
gtttctccatcttcagatgaaaatgaggaagatgctgatcagaagaaacttgaaattgag
ttgagggaaaaagctcttgaatctctcagagctaaaaagggcagcattggtcattag
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