Lactuca sativa (garden lettuce): 111907681
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Entry
111907681 CDS
T05352
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111907681
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111907681
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
111907681
NCBI-ProteinID:
XP_023759263
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Position
8:138233218..138237569
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AA seq
439 aa
AA seq
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MAASLKLFALCSLLLLAIVVSINAVSSEVEKHELQSLVSNSTIADRTSENLDMNKNGDAV
DDPEMVASMVGMSIRNGTERRKLGYFSCGTGNPMDDCWRCDPNWQRHRKRLAECAIGFGR
NAVGGRDGRFYIVTNPNDDDAVNPKPGTLRHAVIQDKPLWIVFKRDMVITLKQELIMNSF
KTIDARGVNVHIANGACITIQYVTNIIIHGLHIHDCKQTGNAMVRSSPSHYGWRTIADGD
GISLFGASHVWIDHNSLSNCADGLIDAIMGSTAITISNNLFTHHNEVMLLGHSDSYVRDK
VMQVTVAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAP
ANPNAKEVTKRVVTTGKWKKWNWRSDGDLMLNGAYFIPSGAGAGGSYAKASSLSAKPSSA
VATLTSGAGALICRRGRQC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctctgaaattgttcgcgctctgctcattgctacttcttgcaattgttgtc
tccatcaatgccgtttctagtgaagtagagaaacatgaattgcagagcttagtaagcaac
tcaacaattgctgacaggacaagcgaaaaccttgatatgaacaagaatggtgatgctgtt
gatgatccagaaatggtggcttccatggttggcatgagcattcgtaatggtacagaaagg
aggaagttaggctacttttcatgcggcaccggaaaccctatggacgattgctggcggtgc
gaccccaactggcagcgccaccgcaagcgtctagctgaatgtgctatcggatttggacgc
aacgccgttggcggccgtgacgggaggttctacatcgtcacaaaccctaacgacgacgac
gccgtcaaccccaaaccaggaactctacgacacgctgtcatccaagacaaacctttatgg
attgtattcaagagagacatggttattaccctaaaacaagaactaatcatgaacagtttc
aaaacaatcgacgctcgtggcgttaacgtccatatcgcaaacggcgcgtgtatcacaatc
cagtacgtcacaaacatcatcatacacggtcttcacatccacgactgcaaacagaccgga
aacgccatggttcgaagctccccgtcgcattacggttggcgaacgatagcagacggcgat
gggatttcgctatttggcgctagtcatgtctggatcgaccacaactcgttatcgaactgt
gctgatgggttaatcgatgctatcatgggttcaactgcaattacaatttctaataattta
ttcacccaccacaacgaggtcatgttactgggtcacagtgactcgtacgtccgtgacaag
gttatgcaggtgactgttgcttacaaccatttcggtgaaggccttgttcagagaatgcca
aggtgtaggcatgggtatttccatgttgtaaataacgactacacacattgggaaatgtat
gctatcggcggaagtgcaaaccccacaattaacagtcaaggaaacagattcctcgctccg
gctaaccctaatgccaaagaggtgacaaagagagtggtaacgaccggaaaatggaagaaa
tggaattggagatcggacggagacttaatgttgaacggagcatattttataccatcgggt
gccggagcaggggggagttacgcaaaggcgtcaagtttaagtgctaaaccgtcttcagcg
gtggccactcttacctcaggcgccggtgcacttatctgccggcgaggtagacagtgttag
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