Lactuca sativa (garden lettuce): 111907683
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Entry
111907683 CDS
T05352
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsv03036
]
111907683
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsv04812
]
111907683
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
111907683
Cytoskeleton proteins [BR:
lsv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
111907683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
Cnd1
Adaptin_N
HEAT_Maestro
INTS1_R4
Tti2
MMS19_C
UTP20
MMS19_N
Motif
Other DBs
NCBI-GeneID:
111907683
NCBI-ProteinID:
XP_023759265
LinkDB
All DBs
Position
8:complement(138310284..138317926)
Genome browser
AA seq
1400 aa
AA seq
DB search
MEEALEMARAKDTKERMAGVERLHELLEASRKSLSSSEVTSLVDCCLDLLKDNNFRVSQG
GLQALDSAAVLSGEHLKLHFNALVPATVERLGDAKQPVRDAARRLLLTLMQVSSPTLIVE
RAGSNAWTHKSWRVREEFARTVTSAIGLFASTELPLQRAILPPILQMLYDPNPGVREAAI
LCIEEMYAQIGPQFREELHRHQLPSSMVKDINARLERIEPKRPSEIRVNTYPPTGAKSSN
HNPKRSSPKAKASSREVSLFGGDSDVTEKPVDPIKVYSEKELIREFEKAASILVPEKDWS
VRIGAMQRLEGLVIGGAIDYPCFRGLLKQLVGPLSTQLADRRSSIVKQACHLLNFLSKEL
LGDFESCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARILPRVADTAKHDRSA
ILRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVGDAMSEVRATARACYRMFSKTW
PDRSRRLFSLFDPVIQRIINDEDGGMHRRHASPVVRERTPQTSSHNNSTSTLSGYGTSAI
VAMDRNASLPSAPSPSLSSSLFSSQPKSMSKAPERSLESVLHASKQKVTAIESMLRGLDS
GRVRSSSLDLGVDPPSSRDPPYPLAAPASNSLATSLSLDSTSGISKGNNRNGGLGLSDII
TQIQASRDSSKHPYRSGNNTTNTHENFSSLSSYTTRRGSERSSFEDNNDIREARRSVNSH
HTDTRHYSEYSHNTSHVPNFQRPLSRKNIPGRMASNRRRSFDESQFSPGEMSSYTDGPSS
LNDALSSGLNSSSDWNARVAAFNYLHSLLQQGPKGVQEVTQSFEKVMKLFFQHLDDPHHK
VAQAALTTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQPCSTTLEIVGKSYGVD
SLLPALLRSLDEQRSPKAKLAVIEFAIIAFNKHAGNSEGAGNSGILKLWLAKLAPLVYDK
NTKLKEAATTCIISVYSHFDSTSVLNYILSLSVEEQNSLRRALKQHTPRIEVDLMNYLQQ
KKDRSQRAKSYDPYDAVGTSSEEGYVQVTSTKKTPLFARYSGSSIDSSDGGKKWGSGSGL
EASTQIVRHDGSDDNLYQSLDSNNGNALSSKDAKYVASSMMSESLDMEAASTPRFNGRQV
DIEGPTDLELNVTKLAALKINSSPDTRPSIPQILHLISNGTDECSTTTKRTALQQLVDAS
VANDSSVWTKYFNQILMVILEVLEDTDPSIRELALLLISEMLKNQKDGMEDSIEIVAEKL
LHLTKDTIPKVSNEAEHCLSVVFSQYDPFRCLSVIVPLLVTEDEKTLVACINCLTKLVGR
LSQEELMGQLDSFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGKGFLPYLEGLNSTQLR
LVTIYANRISQARTGAPIQD
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggctctcgaaatggcacgcgccaaggacacgaaagagagaatggctggagta
gagaggcttcatgaacttctagaagcttcgaggaagagtttatcgtcttcggaagttact
tctcttgtcgattgttgcttagatctcttgaaagataacaattttagggtttcgcaaggg
ggcttacaggctcttgattctgctgcggttctttccggtgaacacttgaaacttcatttc
aatgccctagttcctgctactgttgagcgtctcggcgatgctaagcagcccgttcgcgat
gcggctcgacgcctcttgctcactctcatgcaggtttcatctccaactcttattgtggaa
agagctggatctaatgcctggactcacaaaagctggagagttagagaagagtttgcaaga
actgtgacatctgccattggtctatttgcatctacagagctacccctgcaacgtgctatt
cttcctcctatattacagatgttatacgaccctaatccaggtgtgagagaagccgctatt
ttatgcatcgaggagatgtatgctcaaattgggcctcaattccgtgaagaactccatcgc
catcagcttccatcatcaatggtaaaagatatcaatgccagattagaaagaattgaacca
aaacgtccttcagaaatacgagtcaatacttatcctcctactggtgccaagtcttctaac
cataatcccaaaagaagcagcccaaaagccaaggcttcctctcgtgaagtttcccttttt
ggaggggatagtgatgtcactgaaaagcctgtagacccaataaaagtgtattcagagaag
gagctgatccgtgagtttgagaaggctgcttcaatccttgttcctgagaaagattggtct
gttcgtattggagccatgcaaagacttgaaggccttgtcattggaggtgcaattgattat
ccatgtttccgtggccttctaaagcaacttgttggtcctctaagcacacagttagctgat
cgaaggtccagcatagttaagcaggcttgccacttactgaactttctatctaaagagctt
ttgggagattttgagtcatgtgcagagatgttcattcctgtccttttcaaacttgtggtg
atcactgttcttgtaattgcagagtcagcagacaactgcataaaaacgatgttgcgtaac
tgcaaagttgcccggatacttcctcgtgttgctgacactgcaaaacatgaccgcagtgcg
atacttcgtgccagatgctgtgagtatgctttattgatactggagtattgggctgatgct
cctgagatacaacgttcagctgatctgtatgaagaccttattaaatgctgtgtgggagat
gcaatgagcgaggtgcgggcaactgctagagcatgctacagaatgttctccaagacatgg
cctgatcgttcgcgtcgattgttttcattgtttgatcctgttattcaaaggataataaat
gacgaggacgggggtatgcacaggcgacatgcatcacctgtagttcgtgagaggacccca
caaacatcatcacataataacagtacttcaactctatcaggatatggaacttcagcaatc
gttgcaatggacagaaacgcaagcttaccttctgcaccctcaccttctctctcatcctcc
cttttttcatcacaaccaaaatccatgagcaaggcccctgaacgcagcctagaaagcgtc
ttacatgccagcaaacagaaggtcactgccattgaaagcatgcttcgaggcttagattcc
ggaagagttcgatcatcaagtctcgatcttggagtggacccaccttcatctcgtgaccca
ccataccctcttgcagcccctgcttccaatagcctcgcaacctctttatctttagattct
acttccggtatctcaaaaggcaacaaccgaaacggtggcttgggtttatcagacatcatc
actcaaatccaagcttcacgcgattcttccaagcacccgtatcgcagtggtaataacacc
acaaacacacatgaaaacttttcatcactttcatcctacacaacaagacgaggctctgaa
agaagctctttcgaagacaacaatgatatcagagaagccagacgatcagtcaactcgcat
catacagacactagacactattcagaatactcacataatactagtcacgtccccaatttt
caaagaccactttcaagaaagaatattcccgggagaatggcatcaaacagacgaaggagt
ttcgatgagagccaattctcacccggagagatgtcaagctatacagacgggccatcttct
cttaatgacgcgttaagctccggtctcaattccagctcagactggaacgccagggtggcg
gctttcaactatttacactcgctactccaacaaggaccaaaaggtgttcaagaagtcaca
caaagttttgagaaagtcatgaagctattcttccaacacttagacgaccctcaccataaa
gtcgcacaagccgcgttaacaacactcgctgacatcatccctgcttgtcgaaagcctttc
gaaagttacatggagagaatattaccacacgtgttttcccggctaatcgatccaaaggag
ttagttagacaaccatgttcaacaactttagaaattgtcgggaaaagttacggtgtggat
tcacttttacccgcgttactcaggtcattagacgaacaacgatccccgaaagcgaaactt
gctgtgattgaatttgctattattgcgtttaacaaacatgcgggaaactcagaaggtgct
gggaatagcgggattttgaaactatggcttgctaaattagctccattggtttatgacaaa
aatacaaaactcaaagaagcggctacaacgtgtattatatcggtttactctcatttcgat
tcgacttctgttttgaattatatccttagtttatcggttgaagaacagaattctttgaga
cgtgcattgaagcaacatacgcctcggattgaagtggatttgatgaattatttacaacag
aagaaagacagatcacaacgcgcgaaatcttatgatccgtatgatgctgttgggacctct
tctgaagaaggatatgttcaggtgactagtactaaaaagactccattgtttgcaaggtat
tctggtagttctattgatagtagtgatggtggtaagaaatggggatcgggttctggtcta
gaagcatctacacagattgtaagacatgatggaagtgatgataatctgtatcaaagtctt
gattccaataatggcaatgcactttcttctaaggatgcaaagtatgttgctagttccatg
atgtcagaaagtttagacatggaggctgcttcaacaccgcgtttcaatggacgacaggtt
gatattgagggtccaactgatttggaacttaatgtcacaaaacttgcagctttgaagatc
aattcttcccctgatacaagaccaagcatccctcaaatccttcatcttatttctaatggg
actgatgaatgctctacaacaaccaagcgcactgccttacaacagttggttgatgcttct
gttgccaatgattcctccgtatggacaaagtatttcaatcaaattttgatggtgatactt
gaggttttggaggacaccgatccatcgattcgggagcttgctctgttgttaatatcggaa
atgttgaagaatcagaaagatggcatggaagattctattgagattgtagccgaaaagtta
ctacatcttacgaaagatacaatcccaaaagtatcaaatgaagcagaacattgtttaagt
gttgttttttctcagtatgatccattcagatgtttaagtgttatcgttccattattggtt
actgaagatgagaaaactcttgttgcgtgtataaactgtttgacaaagcttgtgggtagg
ctttcacaggaggaactaatgggtcaattagattcctttttgcctgctctttttgatgct
tttggtaatcagagtgccgatgtccgcaagactgttgttttctgtttggtggatatctac
ataatgcttggaaaagggtttttaccatatttggaaggactcaacagtacacagttacgg
ttagtaacgatatatgcaaaccgtatatcacaagccaggacgggagctcctatccaggac
tag
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integrated database retrieval system
