Lactuca sativa (garden lettuce): 111908016
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Entry
111908016 CDS
T05352
Name
(RefSeq) pleiotropic drug resistance protein 1 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111908016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111908016
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
111908016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_25
AAA_16
AAA_29
AAA
AAA_28
nSTAND3
RsgA_GTPase
TIP49
Motif
Other DBs
NCBI-GeneID:
111908016
NCBI-ProteinID:
XP_023759596
LinkDB
All DBs
Position
5:75941221..75949773
Genome browser
AA seq
1444 aa
AA seq
DB search
MEGREGFRANSSNIWRNSGRDVFSRSSREEDDEEALKWAAIERLPTNLRLQRGILTEEKG
CPKEINVKNLGLVDRMNLLERLVKIAEEDNEKFLMKLRGRIDRVGIRLPTIEVRFEHLNV
DAEAYIGGRALPTIFNFLVNILEGSLNYLHLLPSRKKTLPILHDVSGIVKPGRMTLLLGP
PSSGKTTLLLALAGKLGSDLQVSGRVTYNGHEMDEFVPQRTSAYISQYDLHIGEMTVRET
LAFSARCQGVGANYEMLAELSRREKEANIKPDPDLDIYMKASSIEGQEASVVTEYVIKIL
GLEVCADTVVGDEMFRGISGGQKKRVTTGEMMVGPSRVLLMDEISTGLDSSTTFQIVNSI
KQSIHILEGTSVISLLQPAPETYDLFDDVILLADGQVVYQGPRENVLEFFEYMGFKCPER
KAVADFLQEVTSKKDQEQYWIRKNEAYSFVTVQEFSEAFRLFHVGRKLGDELGAAFDKTK
SHPAALTTKKYGVSKKELLKACISREYLLMKRNSFVYIFKMTQLTFLATTTMTLFLRTEM
PKKTIVDGTVFMGAMFFTILTITFNGFSELGLSIIKLPVFYKQRDLLFYPAWVYSLPTWF
LKIPVTILEVATWVILTYYVIGFDPDAGRFFRQLLLLICIHQMASAVFRFIAALGRNIIV
ANTVGSFAFLAFIVLGGFVLARDDIKSWWAWGYWLSPLMYGQNGMAVNEFLGKDWRQVLP
NSTETIGVAVLKSRGLFPEAKWYWISVGALLGYMLVFNIFNILALTFLNPLGKPQAVLSE
EELAARNAIKTGDAIELAVRDSSVYTETKEIRRSISSKSMSSRVGTITEADKRKKRGMVL
PFVPLSLTFDEIRYSVDMPQEMKAQGVPEDKLELLKGVSGSFRPGVLTALMGISGAGKTT
LMDVLAGRKTGGYTEGRISISGYPKKQETFARISGYCEQTDIHSPHVTVSESLQYSAWLR
LPPEVDSPTKKMFIEEVMELVELTPLSKALVGLPGVNGLSTEQRKRLTIAVELVANPSII
FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIY
FGPLGRHSCHLIKYFEDIDGVSKIKDGYNPATWMLEVTSGAQESALGVDFAEIYKKSELY
KRNKELINENSQPPPGSTDIHFRTQYSQSFWTQCMACLWKQHWSYWRNPPYTAVRFLFTT
FIALMFGTIFWDMGSKREKQQDLFNAMGSMYAAVTFIGVQNAVSVQPVVSIERTVFYRER
AAGMYSAFPYAFGQVMIEIPYIFVQTIVYGIIVYAMIGYEWTIVKFFWQLFFMFFTLLYF
TFYGMMTVAVTPNHNIAAIISSAFFALWNLFSGFIVPRTRIPIWWRWYYYICPVAWTLYG
LVVSQFGDVKEKLESGETVSEFVSSYFGFDYDFLGFVAVINVGFAVLFGFIFAYSIKAFN
FQTR
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggagggtagggaaggatttagagctaacagttcaaacatatggaggaacagtggtaga
gatgtcttttcaagatcttcacgtgaagaagacgatgaagaagcattaaaatgggcagct
attgagagactgcccacaaatcttcggttacaaagaggcatactgaccgaagaaaaaggc
tgcccgaaagagattaatgttaagaatcttggattggttgacagaatgaatctgttggag
aggcttgttaagatagctgaagaagataatgagaagtttttgatgaagcttagaggaaga
attgatcgagttggaattcggcttccaactattgaagttcggtttgagcatttgaatgtt
gacgcggaagcttatattggtgggagagctttacctactatattcaacttcttggttaac
atcctagagggatccttaaattatttgcatcttcttcccagtagaaagaaaacattacca
attcttcatgatgtcagtggtattgttaagcctggcagaatgacattgctgttaggccca
ccaagctctggtaaaacaacactacttttggctttggctggaaaacttgggtcagattta
caagtatcgggaagagtgacatacaatgggcatgaaatggacgaatttgtccctcaacga
acatctgcttatataagtcaatatgatcttcatattggagaaatgacagtaagagaaaca
cttgctttttcagccagatgccaaggagttggagcaaattatgaaatgttggcagaattg
tcaagaagagaaaaggaagcaaacatcaagcctgatcctgatcttgacatctacatgaag
gcatcatcaatagaaggtcaagaggctagtgttgtcaccgagtatgttatcaagatttta
ggtcttgaagtgtgtgcagacactgtagtaggagatgaaatgtttaggggcatttcaggg
ggacaaaaaaagcgagtcacaacaggcgaaatgatggtggggccatcaagagtgttgcta
atggatgagatctcaacgggtttagacagttcaaccactttccaaatagtgaattcaatt
aagcaatcaattcacatacttgaaggaacttctgtcatctcactccttcaacctgcacct
gaaacctatgacctatttgatgatgtcatacttttagcagatggacaagtcgtgtatcaa
ggtcctagagaaaatgtgcttgagttctttgagtacatgggtttcaaatgtcctgaaaga
aaagcagttgctgattttttacaagaagtaacatcaaagaaagatcaagagcaatactgg
ataagaaaaaatgaagcttacagttttgttacagtgcaagaattctcagaagcatttcgg
ttgtttcatgtgggaagaaaactaggtgatgaacttggtgctgcatttgacaaaacaaag
agtcaccctgcagctttaactacaaaaaaatatggtgttagcaaaaaagaattgctaaaa
gcttgtatatctagagaatacctgcttatgaaaagaaactcctttgtgtatatattcaaa
atgacacagcttacttttttggctacaacaacaatgacactattcctacgaactgagatg
ccaaagaaaacaatagtggatggaacagtattcatgggtgctatgtttttcacaatactc
acgattacatttaatggattctctgagcttggtttaagcattataaaacttcctgtgttc
tacaagcaaagagaccttctcttctatcctgcatgggtatattcactacccacatggttc
ctcaagatcccagtaacaattcttgaagttgccacatgggtaatcttgacgtattatgtc
atagggtttgatccagatgccggaaggtttttcagacagttgcttctgctcatatgcatt
caccaaatggcttcagcagtatttcgtttcatagcagcattaggaaggaatatcattgtt
gccaacacagttggatcatttgcatttcttgcatttattgtgctaggtggattcgtcttg
gcccgagatgatataaagagttggtgggcatggggttactggctttcacctttgatgtat
gggcagaatggtatggctgtcaatgagttccttggaaaagattggagacaagttttacca
aactctacagaaacaataggtgttgctgtcctaaagtctagggggcttttccctgaagca
aaatggtattggatctctgtaggtgctttacttggatatatgttggtttttaatatcttc
aacatcttggctctcacttttctaaatcccttagggaagcctcaggcagttctatctgag
gaagaattggctgcacgaaatgctataaaaacaggagacgcgattgaattagcagtgaga
gattcatcagtatatacagaaacaaaagaaattcgaagaagtatatcgtcaaagtcaatg
tcatcaagagtaggcactataactgaagctgataagagaaagaagcgtgggatggttttg
ccttttgttcccctttccctcacatttgatgaaatcagatactcagtggatatgcctcag
gaaatgaaagctcaaggggttccagaagacaagctagaattgttgaagggtgttagtggt
agttttaggccgggggttctcacagctctaatggggattagtggtgctggtaagactact
ttaatggacgtcttagcgggtcgaaaaacgggtgggtacaccgagggaaggatcagtata
tccgggtacccaaagaaacaagaaacatttgctcgcatatccggatactgtgagcaaacc
gatattcattccccacatgtcactgtatccgaatccctacagtattccgcatggctacgc
ttgcctcctgaagttgattcaccaactaaaaagatgtttattgaggaggtgatggagctt
gtggagctaactccactaagcaaagcgcttgtgggattgccgggtgtgaatgggctttcg
acagaacaaagaaagagactcacaattgcagttgagttagtggcaaatccgtccataatt
tttatggatgagccgacatctggattggatgcaagggcggcggctatagtcatgagaaca
gttagaaacactgttgacacgggtcgaactgtcgtctgtacaatacatcagccaagtatt
gacatttttgatgcttttgatgagctacttcttttgaaacggggaggtgaagagatatac
tttggaccattaggccgtcattcttgtcatttgatcaagtactttgaggacattgatgga
gtgagcaaaattaaagatggttataatccggcaacatggatgttggaggtgacctcagga
gcacaggaatcagctttaggtgttgactttgctgaaatatacaaaaaatccgaactatac
aagagaaataaggaattgataaatgaaaatagccaacccccacctggctcaaccgatata
cattttcgtacacaatattcccaatctttttggacacaatgtatggcatgtctatggaaa
caacattggtcatattggcggaacccaccatacactgctgtgaggtttttgttcacaaca
tttatcgcgttgatgtttgggacaatcttctgggacatggggtcaaaaagggaaaaacaa
caagatcttttcaatgcgatgggttctatgtatgctgctgtaacatttattggagtacaa
aatgcggtatccgtgcagcctgttgtttctattgaaagaacggttttctatagggaaaga
gctgctgggatgtactcagcttttccatacgcttttggacaggttatgattgagatacca
tatatttttgttcaaacaattgtatacgggattattgtatacgcgatgattggatacgag
tggacaatagtgaaattcttttggcaactcttctttatgttcttcacattactctacttc
acattttatgggatgatgacagttgcagtcacacctaaccacaacatcgctgctataatc
tcatctgctttttttgcattatggaatcttttctccggattcattgttccacgaacaagg
ataccgatatggtggaggtggtactactacatatgtcctgttgcttggacactatacgga
ttggttgtttcccaatttggagatgtgaaagagaagctagaatcaggtgaaacggtttca
gagtttgtcagcagttattttgggtttgactatgactttttagggtttgttgctgtaatc
aatgtcggatttgctgtcctatttgggtttatttttgcatactccataaaggcgtttaac
tttcaaacacggtaa
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