Lactuca sativa (garden lettuce): 111908017
Help
Entry
111908017 CDS
T05352
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111908017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111908017
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
111908017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_25
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_28
RsgA_GTPase
nSTAND3
ABC_ATPase
TIP49
Motif
Other DBs
NCBI-GeneID:
111908017
NCBI-ProteinID:
XP_023759598
LinkDB
All DBs
Position
5:75875549..75888254
Genome browser
AA seq
1442 aa
AA seq
DB search
MEGREGLRVNSSNIWRNSGRDFFSRSSREEDDEEALQWAAIERLPTNLRLQRGILTQEKG
SPKEIIVKNLGLVDRMKLLERLVKIAEEDNEKFLMKLRERIDRVGLRLPTIEVRFEHLNV
DAEAYIGGRALPTIYNFLVNILEGSLNYLHLLPSRKKALPILHDVSGMIKPGRMTLLLGP
PSSGKTTLLLALAGKLGSDLQVSGRVTYNGHEMDEFVPQRTSAYISQYDLHIGEMTVRET
LAFSARCQGVGANYEMLAELSRREKEANIKPDPDLDIYMKASSLEGQEASVVTEYVIKIL
GLEVCADTVVGDEMFRGISGGQKKRVTTGEMMVGPSRVLLMDEISTGLDSSTTFQIVNSI
KQSIHILEGTSVISLLQPAPETYDLFDDVILLADGQIVYQGPRENVLEFFEYMGFKCPER
KAVADFLQEVTSKKDQEQYWIRKNEAYSFVTVQEFSEAFRLFHVGRKLGDELGVAFDKTK
SHPAALTTKKYGVSKKELLKACISREYLLMKRNSFVYIFKMTQLTFLATTTMTLFLQTEM
PKKTILDGTVYMGAMFFTLLTITFNGFSELGLSIIKLPVFYKQRDLLFYPAWVYSLPTWF
LKIPVTILEVAVWVILTYYVVGFDPDAGRFFKQMLLLICINQMASAVFRFIAALGRNIII
ANTIGSFSFLAFLVLGGFVLARDDIKSWWAWGYWISPLMYGQNGMAVNEFLGKDWRQVLP
NSTETLGVAVLKSRGLFIEAKWYWISVGALLGYMFVFNIFNILALTFLNPLEKPQAVLSK
EELVARNAIKTGDTIELSVRDSSETKEVPRSVSSKSMPTRVGTSIIEAEKRKRRGMVLPF
VPLSLTFDEIRYSVAMPQEMKAQGVPEDKLELLKGVSGSFRPGVLTALMGISGAGKTTLM
DVLAGRKTGGYTEGRISISGYPKKQETFARISGYCEQTDIHSPHVTVSESLQYSAWLRLP
PEVDSPTKKMFIEEVMELVELTPLNKALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM
DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYFG
PLGRHSCHLIKYFEEIDGVNKIKDGYNPATWMLEVTSEAQESALGVDFAEIYKNSDLYKR
NKEVINRNSQPPPGSTDIHFRTQYSQSFWTQCIACLWKQHWSYWRNPPYTAVRFLFTTFI
ALMFGTIFWDMGSKRKKQQDLFNAMGSMYAAVTYIGVQNAVSVQPVVSIERTVFYRERAA
GMYSAFPYAFGQVMIEIPYIFVQTIVYGIIVYAMIGYEWTIVKFFWQLFFMYFTLLYFTF
YGMMTVAVTPNHNIAAIIASAFFALWNLFSGFIVPLTRIPIWWRWYYYICPVAWTLYGLV
VSQFGDVKDKLESGETVSEFVSNYFGFDYDFLGYVAIINIGFAVLFGFIFAYSIKAFNFQ
TR
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggagggtagggagggattacgagttaacagttcaaacatatggaggaacagcggaaga
gatttcttttcaagatcttcacgtgaagaagacgatgaagaagcattacaatgggcagcc
atcgagagactgcccacaaatcttcggttacaaagaggcatactgacccaagaaaaaggc
agcccgaaagagattattgttaagaatcttggattggttgacagaatgaagctgttggag
aggctggttaagatagctgaggaagataatgaaaagtttttgatgaagcttagagaaaga
attgatcgagttggacttcggcttcctactattgaggttcggtttgagcatctgaatgtc
gacgcggaagcttatattggtggcagagctttacctactatatataacttcttggttaac
atcctagagggatccttaaattatttgcatcttctccccagcagaaagaaagcattacca
atccttcatgatgtcagtggtatgattaagcctggcagaatgacattgctgttaggccca
ccaagctctggaaaaacaacactacttttggctttggctggaaaacttgggtcagattta
caagtatcaggaagagtgacatacaatgggcatgaaatggacgaatttgtccctcaacga
acatctgcttatataagtcaatatgatcttcatattggagaaatgacagtaagagaaaca
cttgctttttcagccagatgccaaggagttggagcaaattatgaaatgttggcagaattg
tcaaggagagaaaaggaagcaaacatcaagcctgatcctgatcttgacatctacatgaag
gcatcatcactagaaggacaagaggcaagtgttgtcaccgagtatgttatcaagatttta
ggtcttgaagtgtgtgcagacactgtagtaggagatgaaatgtttaggggcatttcaggg
ggacaaaaaaagcgagtcacaacaggcgaaatgatggtggggccatcaagagtgttgcta
atggatgagatctcaacgggtttagacagttcaaccactttccaaatagtgaattcaatt
aagcaatcaattcacatacttgaaggaacttctgtcatctcactccttcaacctgcacct
gaaacctatgacctatttgatgatgtcatacttttagcagatggacaaatcgtgtatcaa
ggtccccgagaaaatgtgcttgaattctttgagtacatgggtttcaaatgtcctgagaga
aaagcagttgccgattttttacaagaagtaacatcaaagaaagatcaagagcaatactgg
ataagaaaaaatgaagcttacagttttgttactgtacaagaattctcagaagcatttcgg
ttgtttcatgtgggaagaaaactaggtgatgaacttggtgttgcatttgacaaaacaaag
agtcaccctgcagctttaactacaaaaaaatatggtgttagcaaaaaagaattgctaaaa
gcttgcatatctagagaatacttgcttatgaaaagaaactcctttgtgtatatattcaaa
atgacacagcttacgtttttggctacaacaacaatgacactattcctacaaactgagatg
ccaaaaaaaacaatattggatggaacagtttacatgggtgctatgtttttcacgttactc
acaattactttcaatggattctctgagcttggtttaagtattataaaacttcctgtgttc
tacaaacaaagagaccttctattctatcctgcatgggtatactcactacccacatggttc
ctcaagatcccagtcacgattcttgaagttgccgtatgggtaatcttgacgtattatgtc
gtagggtttgatccagatgccggaaggtttttcaaacaaatgcttctgctcatatgcatt
aaccagatggcttcagcagtatttcgtttcatagcagcattaggacggaatatcattatt
gccaacacaattggctcattctcatttcttgcatttcttgtgttgggtggattcgtcttg
gcccgagatgatataaagagctggtgggcatggggctactggatttcacctttaatgtat
gggcagaatggtatggctgtcaatgaattccttggaaaggattggagacaagttttacca
aactctacagaaacattaggtgttgctgtccttaagtctaggggacttttcattgaagca
aaatggtattggatctctgtaggtgctttacttggatatatgtttgtcttcaatatcttc
aacatcttggctctcactttcctaaaccccttggagaagcctcaggcagttctatctaag
gaagaattggttgcacggaatgctataaaaacaggagacacgattgaattatcagtgaga
gattcatcagaaacaaaagaagttccaagaagtgtatcctcaaagtcaatgccaacaaga
gtaggcacgtctataattgaagcagaaaaaagaaagaggcgtggaatggttctacctttt
gttcccctttccctcacattcgatgaaatcagatactcggtggctatgcctcaggaaatg
aaagctcaaggggttccagaagacaagctagaattgttgaagggtgttagtggtagtttt
aggccgggggttctcacagctctaatggggattagtggtgccggtaagactactttaatg
gacgtcttagcgggtcgaaaaacgggtgggtataccgagggaaggatcagtatatccggg
tacccaaagaaacaagaaacatttgctcgcatatccggatactgtgagcaaaccgatatt
cattccccacatgtcactgtatccgaatccctacagtattccgcgtggctaaggttgcct
cctgaagttgattcaccaactaaaaagatgtttattgaggaggtgatggagcttgtggag
ctaactccactaaacaaagcgcttgtgggattaccgggtgtgaatgggctttcaacagaa
caaagaaagagactcacaattgcagttgagttagtggcaaatccgtcaataatttttatg
gatgagccgacatctggattggatgcaagggcggcggctatagtcatgagaacagttaga
aacactgttgacacgggtcgaactgtggtgtgtacgatacatcagccgagcattgacatt
tttgatgcttttgatgagctacttcttttaaaacgaggaggtgaagaaatatactttggt
ccattaggccgtcattcttgtcatttgatcaagtactttgaggagattgatggagtgaac
aaaattaaagatggttacaatcccgcaacatggatgttggaggtgacctcagaagcacaa
gaatcagctttaggtgttgactttgctgaaatatacaaaaactcagatctatacaagaga
aataaggaagtgataaacagaaacagccaaccgccacctggctccactgatatacacttt
cgaacacaatattcccaatctttttggacacagtgtatagcatgtctatggaaacaacat
tggtcatattggcggaatccaccatacactgctgtaaggtttttgttcacaacatttatc
gcgctgatgtttgggacaatcttttgggatatggggtcgaaaaggaaaaaacaacaagat
ctgtttaatgcgatgggttctatgtatgctgctgtaacatatattggagtacaaaatgcg
gtatccgtgcagcctgttgtgtctattgaaagaacggtattttatagggaaagagctgct
gggatgtactcagcttttccatacgcttttggtcaggttatgattgagataccatatatt
tttgttcaaacaattgtatacgggattattgtatacgccatgattggatacgagtggaca
atagtgaaattcttttggcagctcttctttatgtacttcacgttactctacttcacattt
tatgggatgatgacagttgcagtcacacctaaccacaacatcgctgctataatcgcatct
gctttttttgcactgtggaatcttttctccgggttcattgttccattgacgaggataccc
atatggtggaggtggtactactatatatgtcctgttgcttggacactatacggattagtt
gtttcccaatttggagatgtgaaagacaagctagaatcgggtgaaacggtttcagagttt
gtcagcaattattttgggtttgactatgactttttagggtatgttgctataattaatatc
ggatttgctgtcctatttgggttcatttttgcatactctatcaaggcatttaactttcaa
acacggtaa
DBGET
integrated database retrieval system
