Lactuca sativa (garden lettuce): 111908063
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Entry
111908063 CDS
T05352
Name
(RefSeq) structure-specific endonuclease subunit slx1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111908063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111908063
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111908063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
Motif
Other DBs
NCBI-GeneID:
111908063
NCBI-ProteinID:
XP_023759666
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All DBs
Position
7:complement(49539577..49542043)
Genome browser
AA seq
167 aa
AA seq
DB search
MTRLLSTTFRSIKPHSQLPKSPSIRLPSSSPSSSNSNPSPSVVSKQPNWSVYLILSTNPP
IKTYVGVTTNFSRRLKQHNGELKGGAKASQAGRPWICACLIRGFESKSEACKFEFKWKNI
SRKMGRKRNSKDEGGLYLLQHRNAALEKVKGSTDCNHLEFDWKLQPI
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggttactgtccacaaccttccgatccatcaaaccacattctcagcttccaaaa
tcaccttcaatcagacttccatcttcatcaccatcatcatcaaactccaatccctcgccg
tcggtggtctcaaagcaacctaattggtcggtgtatctaatcttatcgactaatccaccg
atcaaaacttacgttggcgtcaccaccaatttttctcgccgcttgaaacaacataatggt
gaattaaaaggtggtgcaaaagcatcacaagctggaagaccttggatttgtgcatgcctt
attcgaggttttgagagtaaaagtgaagcatgcaagtttgagtttaaatggaagaacata
tcacgtaaaatggggcgtaaaaggaactcgaaggatgagggagggctttatttgttgcaa
catagaaatgcagcactagagaaggtgaaaggctcaaccgattgcaaccacttagaattt
gattggaagctacaacccatataa
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integrated database retrieval system
