Lactuca sativa (garden lettuce): 111908364
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Entry
111908364 CDS
T05352
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00531
Glycosaminoglycan degradation
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
111908364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lsv00536
]
111908364
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
111908364
Glycosaminoglycan binding proteins [BR:
lsv00536
]
Heparan sulfate / Heparin
Enzymes
111908364
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
111908364
NCBI-ProteinID:
XP_023759955
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All DBs
Position
8:complement(93038887..93041668)
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AA seq
526 aa
AA seq
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MGSLSWQIGVYIWVLLITCICIFMDSKVQNGNVFIDGERGIAETDTDFICATMDWWPPEK
CDYGSCSWGYASLLNVDLNNTIFQNAIKAFSPLKIRLGGSLQDELVYETEDQTETCIPFS
KNTSALFNFNPGCLPLSRWDELNTFFNETGAVIIFGLNALNGRKLQADSSTIGAWDSTNA
ESLIRYTVKKNYTIYAWELGNELSGSGVGAKVTASQYAIDTITLKNIVEEIYDGIEPKPL
IISPGGFFDAKWFKDFINKTTEILDVVTHHIYNLGPGVDQHLVEKILNPSVLDNEIDTFK
QLENILEASGSLASAWVGEAGGAYNSGHNLVTNAFVFSFWYLDQLGMSAVYNTKTYCRQS
LIGGNYGLLNTTTFVPNPDYYSALLWHRLMGTTVLATDFSGSKKIRSYAHCAKQSDGITL
LLINLDKTTTFNVNLSIKMSIEIQMVRGGSRTREEYHLTGKDGNLHSQTMVLNGKDLILN
TEGEIPLLEPLYVSSLKPIVVAPYSIVFVHIPYLTLDACSNLVMEL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttgtcttggcagataggtgtatatatctgggttttattgatcacatgcatc
tgtatttttatggattcaaaagttcagaacgggaatgttttcattgatggggaaagagga
attgcagagacagatactgattttatttgtgctacaatggattggtggccaccggagaaa
tgcgattatggttcttgtagctggggttatgcttctctcctcaatgtggatcttaacaac
acaatctttcagaatgcaatcaaagccttttcaccattaaagattcgattgggaggaagt
ttgcaagatgaacttgtctatgaaaccgaagatcaaactgaaacctgcatcccattttcc
aaaaacacctccgcattattcaattttaacccaggctgcttacctctatccagatgggat
gaactaaacaccttcttcaatgaaacaggggctgtaattatttttggattaaatgctctt
aatggaagaaaactgcaagctgatagttcaaccattggagcttgggactccaccaatgct
gaatctttgattcgttatacagttaaaaagaattacaccatttatgcttgggaactcggg
aacgagttaagtggaagtggagttggagcaaaagtaacagcatctcaatacgcaattgac
acaattaccctcaagaacatagtagaagaaatttatgatgggattgaacctaagccacta
attatctcaccaggtggattctttgatgcaaaatggttcaaagacttcataaacaaaaca
accgaaattcttgatgtagtcactcaccatatatacaatcttggcccaggagttgatcaa
caccttgttgaaaagattcttaatccctctgttcttgataacgagatcgatacctttaag
caactcgagaacattctagaagcttccggaagtttagcatctgcttgggttggtgaagct
ggtggagcttacaatagtggccacaatcttgtgactaatgcatttgtgtttagtttctgg
tatttggatcagctaggaatgtcagctgtttacaacacaaagacatactgcagacaatct
ttaattggaggaaattatggtttacttaatacaactacttttgtgccaaatccggattat
tatagtgctcttttgtggcatcgactaatgggaacaacagttcttgctacagactttagt
gggagcaaaaaaatcagatcctatgcacattgtgctaaacaatcagatggaataacactt
ctactcattaatctagacaaaaccactacatttaatgtaaatttgtcgattaagatgtca
attgaaattcaaatggtgaggggtggatcaagaacacgagaggaatatcatctgacaggt
aaagatggaaacttgcatagtcaaacaatggtgttgaatgggaaagatttgattttaaat
actgaaggtgagatacctctgttagagcctttgtatgtaagttctttgaagccaatagtt
gtggctccttattctattgtatttgtgcatatcccatatcttactttggatgcttgtagc
aatttggtcatggagttataa
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