Lactuca sativa (garden lettuce): 111908423
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Entry
111908423 CDS
T05352
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00900
Terpenoid backbone biosynthesis
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
Module
lsv_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
111908423
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lsv01006
]
111908423
Enzymes [BR:
lsv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
111908423
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
111908423
2.5.1.29 geranylgeranyl diphosphate synthase
111908423
Prenyltransferases [BR:
lsv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
111908423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
111908423
NCBI-ProteinID:
XP_023760018
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All DBs
Position
5:69068214..69069490
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AA seq
373 aa
AA seq
DB search
MRSLSFIDSWVQTCSMFNGSSSSSFVGLICKTPMKCSKPNFKIHPRSRVSSSSSSCFSVS
AVITKEEQETVGEISSDCFNFKAYMGEKAVRVNRALDESISIKTPPTIHEAMRYSLLAGG
KRVRPILCIAACELVGGDESTAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKV
YGEDVAVLAGDSLLAFAFQHIASATVGASPERVLAAVGELAKSIGTEGLVAGQVVDIAST
GAKDVGLDQLEFIHIHKTAALLEAAVVLGAILGGGSDTQVEKLRKFARCIGLLFQVVDDI
LDVTKSSEELGKTAGKDLLVDKMTYPKLMGLEKSRQFSEELLAEAKQQLEGFESYKGVAP
LVALAEYIAYRQN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagatctctgagtttcatcgattcatgggttcaaacatgttctatgttcaacggatct
tcgtcatcgtcattcgtcggattgatctgcaaaacgccgatgaaatgcagtaaacccaat
ttcaaaattcatccaagatccagagtttcctcttcttcttcttcgtgtttctctgtttct
gctgtgattaccaaggaagaacaggaaactgtcggcgaaatctcgtcggattgcttcaat
ttcaaggcgtacatgggggagaaagctgttcgggttaacagagcgcttgatgaatccatt
tccattaaaacgccacccacaatccatgaagctatgcgttactctctcctcgccggtggg
aagcgtgtgaggcccattctctgcatcgccgcttgcgagctcgtcggaggtgatgaatcc
accgccatgccagccgcctgcgctgttgaaatgatacacaccatgtcgttgattcacgac
gaccttccgtgcatggataacgacgattttcgccgggggaaaccaacaaaccacaaggtt
tacggcgaagacgtggcggtcctcgccggcgactctctcctcgccttcgctttccaacac
atcgcaagcgccaccgtcggcgcgtctcctgaacgcgttttggccgccgtcggagaactg
gcgaagtcgattgggactgaagggttggtcgcgggtcaagtggtggacatagcttcaaca
ggtgcaaaggacgtcggactggaccagcttgagttcatccacatccacaagacggcggcg
ctattggaagcagccgtcgtattgggagcaatattaggtggaggaagcgacacccaagtg
gaaaagctgagaaagttcgcgagatgcattggattattgtttcaggtggttgacgacata
ttagacgtcaccaagtcgtcggaggaattggggaaaaccgccggaaaagatttactcgta
gacaagatgacttacccgaaactaatgggacttgagaaatcacggcagttctcggaggag
ttgttggcggaagctaaacagcagcttgaagggtttgaatcatacaagggggtggcgccg
ctggtggctctggcggagtatatagcataccggcagaattga
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