Lactuca sativa (garden lettuce): 111908444
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Entry
111908444 CDS
T05352
Symbol
VPS25
Name
(RefSeq) E2F/DP family winged-helix DNA-binding domain-containing protein isoform X1
KO
K12189
ESCRT-II complex subunit VPS25
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111908444 (VPS25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111908444 (VPS25)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111908444 (VPS25)
Membrane trafficking [BR:
lsv04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
111908444 (VPS25)
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111908444 (VPS25)
Exosomal proteins of colorectal cancer cells
111908444 (VPS25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ESCRT-II
WHD_CHMP7_1st
WHD_GTF3C1
Motif
Other DBs
NCBI-GeneID:
111908444
NCBI-ProteinID:
XP_023760039
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All DBs
Position
9:complement(18041412..18044240)
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AA seq
179 aa
AA seq
DB search
MQTLGDHKLPHFFNYPPYFTLQPVRETREKQIQLWKELILDYCRTQKIFIIGLEEDFPLF
SNPAIERSLNHEAREAFLSAIVLDGRAEWMDKSHRQCLILWHRIKDWADLIIRFVKENGL
EDSVMTIEEIRSGIESRGTDIHGMDRTVLVRALKLLENKGKLAIFKGTSTDDEGVKFSV
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcagacacttggcgatcataagttgccccacttctttaattatccgccctactttacg
ttgcagcctgtgagagaaacaagagagaagcaaatacaactatggaaggaacttattctt
gattattgtcgaacacaaaagatatttataattggattggaagaagactttcccctgttc
tccaaccctgcaattgaaaggtctctgaatcatgaagcaagagaagctttcctgtcagcc
atagtcttggatggacgtgcagaatggatggacaagagtcataggcaatgtcttatcttg
tggcatcgtataaaagactgggctgacctcatcatacgctttgttaaggagaatggatta
gaggacagtgtaatgacaattgaggaaatacgttcagggatcgagtcacgtggaacagat
atccatggaatggaccgaactgttctagtgagggcacttaaacttctggaaaacaaagga
aaacttgcaatcttcaagggaacttcaacagatgatgagggcgtaaaattttctgtttga
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