Lactuca sativa (garden lettuce): 111908513
Help
Entry
111908513 CDS
T05352
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111908513
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111908513
Membrane trafficking [BR:
lsv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111908513
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111908513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
INTS1_R4
Coatomer_g_Cpla
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
111908513
NCBI-ProteinID:
XP_023760103
LinkDB
All DBs
Position
3:92331350..92336848
Genome browser
AA seq
948 aa
AA seq
DB search
MEKTCSLLVHFDKGTPALANEIKEALEGNDDAAKIDAMKKAVMLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIDKTDSKGKILPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNETEIIEPLIPSILANLEHRHPFIRRNAILAVMAIYKLPQGDQLLVDAPEMIEKVLS
TEADQSAKRNAFLMLFTCAQERAVNYLLTHVERVAEWGELLQMVVLELIRKVCRANKGEK
GKYIKIIISLLTVPSAAVIYECAGTLVSLSSAPTAIRAAANTYCQLLQSQSDNNVKLIVL
DRLNELKSSHREIMVEMIMDVLRALSSPNHDIRRKTLDIVLDLITPRNINEVVLTLKKEV
VKTQSGELEKDGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAMDVAVFVR
EIIETNPKLRVSIITRLLDTFYQIRSARVCSCALWIISEYCLSLSEVESGISTIKQCLGE
LPFYSASEEGENNDSSKKSQQVNSITVSSKRPAILADGTYATQSAASETAFSPPTVVQGT
LTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLAEVQPLKSEVNRASTQVLLIVVSMIQLG
QSSFLPHPIDNDSYDRIVVCIRLLCNPGEEIKKIWLQSCRESFVQMLADKQMRETEELKA
KAQVSHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFIKEGDAANKLNRILQL
TGFSDPVYAEAYVTVNHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAP
ESSKQIKANIKVSSTETGVIFGNIVYETSNVMERTVIVLNDIHIDIMDYISPAVCSDAAF
RTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALEGDCGFLAANLYAKSV
FGEDALVNLSIEKQGDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGA
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacatgctcactacttgtccactttgacaaagggacacctgcacttgcaaac
gagatcaaagaggctcttgaaggcaacgatgatgctgcaaagattgatgccatgaaaaaa
gcagtcatgcttttactaaatggagaaacactcccacaacttttcatcacaattgttcga
tatgttcttccttcagaggaccacactgttcaaaagctactccttctttatcttgaaatc
attgacaaaacagactcaaaaggaaagatcttacctgaaatgatcttaatttgccaaaac
ttaagaaacaatctccaacatcccaatgaatacatccgtggggtcactctaaggtttctt
tgtcgcctcaatgagacagaaattatcgagcccttaatcccatctattctagctaatcta
gaacacaggcatccattcataagaagaaatgctatacttgctgtaatggctatttacaag
cttccacaaggggatcagcttttagttgatgctccagaaatgattgaaaaagtcctctca
acagaagcagatcaatcagccaaaaggaacgcttttcttatgctgttcacatgtgctcaa
gaacgtgcagtaaattaccttttaacccatgtggaaagagtagctgaatggggtgaattg
cttcaaatggtggtgttggagttgatacgtaaagtctgcagagctaacaagggcgaaaag
ggaaaatacatcaagattatcatatctttattaactgttccttctgctgcagttatctac
gaatgtgcagggacattagtgtcattatcctctgcccctactgctattcgtgcagctgct
aatacctattgtcaactcctccaatctcaaagtgacaacaatgtgaaactcattgttctt
gatcgattaaacgaattgaaatcctctcatcgtgagatcatggttgaaatgattatggat
gttcttagagcactttcaagccctaatcatgacattcgaagaaaaaccctagatattgtt
cttgatttgatcactccacgcaacatcaatgaagttgttctcactttaaagaaagaagtt
gtcaaaacccaaagtggagaattggaaaaagatggagaatatcgccagatgttaatccaa
gctattcattcatgtgctataaagttcccagaagttgcatccacagttgttcatctgtta
atggatttcttgggtgatagtaatgttgcttcagcaatggatgtagctgtttttgtaaga
gaaataatcgaaacaaatccgaaattaagggtttcaatcatcacaaggctgttggatact
ttctatcagataagatctgcacgtgtttgttcttgtgctctttggatcataagtgaatac
tgtctttcattatcagaagttgaaagtgggatttcaactataaaacaatgccttggagag
cttccgttttattcagcttctgaagaaggagaaaacaacgattcttcaaagaaaagtcaa
caagtcaactcgatcaccgtttcctccaaaagaccagctattcttgctgatgggacttat
gcaactcaaagtgcagcttctgaaactgctttttcacctccaactgttgttcaagggact
ttgacttctgggaatttaaggtcacttctgttgactggtgatttctttcttggagctgtt
gtggcatgtactttgactaaacttgtgttgcgattggctgaggttcaacctttgaagagt
gaagtgaatagggcttcaactcaagttttgttgattgttgtgtcgatgattcaacttggg
caatcttcatttttgccacatcctattgataatgattcttatgataggattgttgtttgt
ataaggttgttgtgtaatccaggtgaagagattaagaaaatatggctgcagtcatgtcgt
gaaagttttgttcaaatgcttgctgataaacagatgagggaaactgaggagttgaaagct
aaggctcaggtgtcacatgcacaacctgatgatttgattgatttttatcatctgaagagc
aggaagggaatgagccagctggaattagaggatgaggttcaagatgatctaaaacgtgca
acaggagaattcatcaaagaaggagatgctgcaaacaaactcaaccgaatcctccaactc
actggattcagtgatccagtttatgctgaagcatatgtcactgttaaccactatgacatt
gtccttgatgtaactgtcatcaacagaaccaaagaaacccttcagaacctctgtctggaa
ctggccacaatgggcgaccttaaactcgtcgaacgcccccaaaattacaccctcgcccct
gagtccagcaagcagatcaaagcaaacatcaaggtgtcttcaaccgagaccggggttatt
ttcggaaacatcgtttacgaaacttcaaatgtcatggaacgcactgttattgtcctcaat
gatattcatattgatattatggattatatttctcctgctgtttgtagtgatgctgctttt
agaacaatgtgggctgagtttgagtgggaaaacaaggttgctgtgaacactgtgattcaa
gatgagaaagaatttctcgatcatattattaaatccacaaacatgaagtgcctcactgct
ccgtctgcactggaaggtgattgtgggtttctggctgctaacttgtacgcaaagagtgtg
tttggggaggacgctttggtaaatttgagcattgagaagcaaggagatgggaaactaagt
ggatatattcgtataaggagcaaaacccaagggattgctttaagtttgggggacaaaatt
acccttaagcagaagggaggcgcataa
DBGET
integrated database retrieval system
