Lactuca sativa (garden lettuce): 111908638 Help Entry 111908638         CDS       T05352                                  Name (RefSeq) transcription factor bHLH140   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism lsv  Lactuca sativa (garden lettuce) Pathway lsv03410   Base excision repair Brite KEGG Orthology (KO) [BR:lsv00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     111908638  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:lsv03400]     111908638 Enzymes [BR:lsv01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      111908638     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      111908638     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      111908638 DNA repair and recombination proteins [BR:lsv03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      111908638   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      111908638 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DcpS_C AAA_33 zf-C2HE Macro HIT AAA_18 Zeta_toxin AAA_17 CPT AAA_29 nSTAND3 G-alpha 6PF2K AAA_16 MeaB AAA_5 NACHT AAA_19 AAA_22 Motif Other DBs NCBI-GeneID:  111908638 NCBI-ProteinID:  XP_023760223 LinkDB All DBs Position 8:159376804..159380099 Genome browser AA seq 714 aa AA seqDB search MEIDDEMIKSKGEEEDKKKPIVVILVGAPGSGKSTFCDHVMRVSTRPWVRVCQDTIGNGK AGTKAQCLAISNTSLKEGKNILIDRCNLDKEQRADFVNLKNSHQVDIHAIVLDLPAKLCI SRCVNRTGHEGNLQGGRAAAVVNRMLQKKESPKINEGFTRITFCYNENDVQSAMDTYGSL SSINTLPSGCFGEKKSDSKVQVGIMKFLKRVDAPSKLASNKTDKTEKTDKTTPGPSNDNT TQENHPVNEGKEKKIPFESGTHDGVPTLAFPSISTSDFQFNIEKASEIIVETVEEFVNKI GNGRLVLVDLSHGSKILSLVKTKAAKKNIDSKKFFTFVGDITKLHSGGLKCNVIANAANW RLKPGGGGVNAAIFDAAGPDLDTATKQRAGSLTPGKAITIPLPSTSPLFSKEGVTHVIHV LGPNMNPKRPNCLKDDYQKGCKVLKEAYMSLFGNFESIVRNQEKLCEHFDGVLNSGVEKV RREDDGICSTEKNKKFKGFVEEKEIGGKVNKDWGSWAQALYKIAMNPEKHGNDVIEILDD VVVLNDVYPKAQKHVLVVARVKGLESLSDVGEEHLPILRTMHDVGLKWAQTFLKENESLV FRLGYHSAPSMRQLHLHVISQDFDSKHLKNKKHWNSFNSSFFRDSVDVIEEVREEGKPKL NDDEKFMSMELRCNRCRSAHPNIPRLKSHIAICKSPFPENLLQNGRLLHAPTKV NT seq 2145 nt NT seq  +upstreamnt  +downstreamnt atggaaatcgacgatgaaatgatcaaatctaaaggggaagaagaagataagaaaaagccc atagtggtaatactagtcggcgcacctggaagtggcaaatcgaccttctgtgatcacgtt atgcgggtttctacccgaccctgggtccgcgtctgtcaggacacaattgggaatggcaaa gctggaacaaaagcacaatgtctagctatctccaacacctcattaaaagaaggaaaaaac atactaatcgacaggtgtaatcttgataaagaacaacgtgcagattttgtcaaccttaaa aactctcatcaagtagacatacacgccattgttcttgatcttcctgcaaagctttgtatc tctcgatgtgtaaatcgaactggacatgaaggaaacttacaaggtggaagagctgcagct gtggtcaatcgtatgcttcaaaagaaagaatcacccaaaatcaacgaagggtttacacga ataacattttgttacaatgaaaacgatgttcaatctgccatggatacttatggatcactt tcttccataaatacccttccgtccggctgttttggagagaaaaagtcagattctaaagtc caagttggtattatgaagttcttgaaaagagtagatgctccaagtaaactagcatctaac aaaactgacaaaactgaaaaaactgacaaaactacccccgggccatcaaatgataatacc actcaagaaaaccatcctgttaatgaaggtaaagagaaaaaaataccctttgagagtggg acccatgatggggtccctactttggcatttccttctatatccacgtcagattttcaattt aatattgaaaaggcttcggaaataatagttgaaacagttgaggaatttgtgaacaagatt ggaaatgggaggcttgttttggtggatttgtctcatggatcaaagatattgtctttggtg aaaactaaagctgctaagaagaatatcgactcaaaaaagttttttacttttgtgggagat attacaaagcttcactcaggaggcttaaagtgcaatgtgatagctaatgctgcaaactgg agactaaaacctggtggtggaggtgtaaatgctgccatatttgatgctgcgggacccgat ttagatactgcaactaaacaacgagctggatctcttacccctggaaaagcaatcactatt cctcttccttcaacatctcctttgttttctaaagaaggtgtgacacatgtcatacatgtt cttgggcccaatatgaatccaaaaagaccaaattgcctcaaagatgactatcaaaaggga tgtaaagttcttaaggaggcttacatgtctctttttggaaactttgaatctattgtgaga aatcaagagaaattatgtgaacattttgatggtgttttgaatagtggtgttgagaaggtt aggagagaggatgatggcatatgtagcactgagaaaaacaagaaatttaaaggttttgtc gaagaaaaggagataggtggaaaggtgaataaggattggggttcgtgggctcaagcactt tataaaatcgctatgaatcctgagaaacatgggaatgatgttattgaaatattggatgat gttgtggttttgaatgatgtttacccaaaggcacaaaagcatgttttggtggttgctcga gttaaaggtcttgagagtctttcagatgtaggtgaggaacaccttcctatattaaggaca atgcatgatgtgggtttgaagtgggctcaaacatttttaaaggaaaatgaatcattggta tttcgccttggataccattcggcgccttcaatgagacaactacaccttcatgtaataagt caagattttgactccaaacatctcaagaacaagaagcattggaactcattcaattcttca ttttttcgggattctgtggatgtgattgaagaagtgagagaagaggggaaacctaaatta aacgatgatgagaaattcatgtcgatggagttgagatgcaaccggtgtagaagcgcacac cctaacattcctcgcctcaaatcacatattgctatttgtaaatcaccctttcctgaaaat ttacttcaaaatggtcgcttgttgcatgctcctacaaaagtgtaa

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