Lactuca sativa (garden lettuce): 111908717
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Entry
111908717 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111908717
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111908717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111908717
Spliceosome [BR:
lsv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111908717
Complex C
U4/U6.U5 tri-SnRNP related factors
111908717
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
ECM10
SNRNP27
C2H2-zf_KIN17
Vfa1
Motif
Other DBs
NCBI-GeneID:
111908717
NCBI-ProteinID:
XP_023760288
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All DBs
Position
5:complement(245732602..245735607)
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AA seq
200 aa
AA seq
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MAQPNNTAGVDNTFRRKFDKEEYLQRAREREEKELEGRSKSKGPPVQRKPLKHRDYEVDL
NSRLGKTQVVTPIAPLSQQAGYFCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERAS
LEQVQQRFENLKKRKDPGTFTEQDLDDRILKQQQEEEEKKRQRRERKKEKKKEKAVEEEI
EVDPDVAAMMGFGGFGSSKK
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcccaacaatactgctggagttgacaacactttcagaaggaaattcgacaaa
gaagagtatctgcaacgcgctcgtgagcgtgaagaaaaggagttggaaggccgttctaaa
tcaaaaggtcctccagtgcaaaggaaacccttgaagcatagagattatgaagtggacctc
aactctcgcttggggaagactcaggttgtcactccaattgcaccccttagccagcaggct
ggatacttctgctctgtttgtgaatgtgtagtgaaagactctgcaaactatttggaccat
atcaatgggaagaaacatcaaagagccttgggaatgtctatgcgtgtagaacgtgcatct
cttgaacaggtacagcagcgatttgaaaacctgaagaagcgaaaagatcctggaaccttc
actgagcaagatcttgatgaccggatcttaaaacaacagcaagaagaggaggaaaagaag
cgtcaaaggcgagaaaggaaaaaggaaaagaagaaagagaaggcagtagaggaggaaatc
gaggtggaccccgatgttgcagctatgatgggatttggaggttttggttcttccaaaaag
taa
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