Lactuca sativa (garden lettuce): 111909088
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Entry
111909088 CDS
T05352
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD4
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111909088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111909088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111909088
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
111909088
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111909088
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111909088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
BAR
Ank
Ank_2
PH
Ank_3
Ank_4
Ank_5
PH_11
PH_8
ANK_LRRK2
BAR_2
PH_20
IMD
AvrM_N
PH_13
Motif
Other DBs
NCBI-GeneID:
111909088
NCBI-ProteinID:
XP_052625201
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All DBs
Position
3:complement(46886977..46892869)
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AA seq
822 aa
AA seq
DB search
MTFKRSEPIVQEPKVLHCLAFPDLAKYLPPSPTEKDNPMTAFIKLDDSPMFQKQVRYLEQ
TTDELKLRCQKLHKGSKKYMDGLGEACNMDLLFADSVEAFGGGQDDPVSVSIGGPIMTKF
VSAFREIETFKELLRSQVEHLLVDRLAQFLSEDLQDTKDSRKRFDKAAHSYDQAREKVAS
LKKSTRDEVVAELEEDLQNSKSTFERSRFNLVNSLTNIEAKKKYTFLESLSAIMDAHLRY
FKLGYELLSQMEPFIHQVLTYAQQSKEQASIEQDRLAKRIQEFRTQAETKVPLPINVGPT
TTTTGVTVNGVGMNSDKNIDAIMQSTTKGTVQTIKQGYLLKRSSSLRADWKRRFFVLDSR
GNLYYHRIPPNKPIASQSSNSLASTEQQSRVFGRFRSRHTRAASHDDENLSCHTVDLRTS
IIKLDAEDSDLRLCFRIISPLKAYTLQAENEADRIDWMNKITGVIASLLNSHLNQTHFGR
SNLGNISEAVDDDFTVLSFNNEGGSTGDNMDMNPADSVSSILREIPGNDLCAECGALDPD
WASLNLGILMCIECSGVHRNLGVHISKVRSINLDVKVWEPTVMELFRNLGNKYCNSVWEK
LPQTNKFFIEDETDAVLVSKPNPKDAIQQREKYINAKYVEKLFVEASNGSNPNPSSNATR
IWEAVKGNNIQEVYRMIATSNSNSNIVNATTYDDVAPSDLIHDLDSTKDSDPKLCKRIKD
SRRPESCLQGSTLLHLACGSGYQVMVELLLQFGADINRPDYHGRTPLHHCIFSGNNKLAK
YMLRRGAIPSIKDGGGQGALERAMEMGAITDDELLILLSDGK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaagcgatctgaacctatagtccaagaacccaaggtactccattgtttggcc
ttcccagatttagccaagtatctgcctccttccccaacagaaaaggacaaccctatgact
gccttcatcaagctcgatgattctccgatgttccaaaagcaggtgcgttatcttgaacag
acaacagatgagctcaagcttcgttgtcaaaaactacacaaagggagcaaaaagtatatg
gatggtcttggggaagcatgcaatatggaccttctatttgcagactcagtggaggctttt
ggtggtggacaagatgaccctgtcagtgtatcaattggaggtccaataatgactaaattc
gttagtgcttttcgagagattgaaacgtttaaagagcttcttcgttcccaagttgaacat
ttactcgttgatcgtttagcacagtttctgtccgaggatctgcaagatacaaaggactca
cgtaaacgatttgacaaagctgcacattcatatgatcaggctcgtgaaaaggttgcatct
ttgaaaaagagtacacgggatgaagttgttgctgaattagaggaggatctacagaactca
aaatcaacatttgagaggagcagattcaatctagtaaattctctcacaaacatagaagca
aaaaagaaatacacatttttggaatctcttagtgcaataatggatgctcatttgagatat
tttaagctggggtatgaactattgagtcaaatggagcctttcattcatcaggtgttgaca
tatgcccaacaatctaaggaacaagcaagtattgaacaagatagacttgcaaaaagaatt
caagaatttaggacacaagcagaaacaaaggtcccactgcctattaatgtgggccccact
acaaccacaactggtgttactgtaaatggtgtcggaatgaattctgataaaaatatagac
gccataatgcagtccacaacaaaaggaacagtccagacaatcaaacaagggtatctttta
aaaaggtcttcaagtttacgagcggattggaagagacgattttttgtacttgatagccgt
gggaacttatattatcatcggattccacctaacaaacctatcgcttcacaatcatcaaat
tcacttgcgtctactgaacaacaaagccgtgtatttgggaggtttagatcaaggcataca
agggcagcatcacatgatgatgaaaatttgagttgtcatactgttgatcttcgtacttcc
attataaaacttgatgctgaagattcggatttacgtttatgtttcaggataatttctcca
ttaaaagcttacacactgcaggctgaaaatgaagctgataggattgactggatgaacaag
atcacaggagtaattgcctctctcttgaactcccacctgaatcagacacattttggaaga
agtaatttgggcaatatcagcgaagcagttgatgacgattttactgtgttgagttttaat
aacgaggggggatctacaggtgataacatggacatgaatccagcagattctgtctccagt
attcttcgagagattcctggaaatgatctgtgtgcagaatgtggtgcacttgatcctgat
tgggcgtctcttaatcttggcatattaatgtgcattgaatgctctggtgtacaccgcaat
cttggagttcacatatcaaaggtgaggtcaatcaatctagatgtgaaagtttgggaacct
acagttatggaactgtttagaaatttggggaataaatactgcaattccgtatgggagaaa
ctacctcaaaccaataaattttttatcgaggatgaaacagatgctgttttggttagcaag
cctaatcctaaagacgcaattcaacagagggagaaatatatcaatgcaaagtatgtggag
aagctgtttgtagaagccagcaatggtagtaaccctaacccttcttcaaatgccacaaga
atatgggaagcagtcaagggcaacaacatacaagaggtatatcgcatgattgctacatca
aattcaaattcaaatattgtgaatgccacaacatacgatgacgtggcgccttccgatttg
atccacgatcttgattccactaaagattcggatccaaaattgtgtaaaagaataaaggat
tctagaaggccggaaagttgtcttcaagggagcacgttgttgcatttagcatgtgggtcc
gggtatcaagtgatggttgaactgttgctacagtttggtgctgatataaacaggcctgac
taccatggcaggacgcctcttcatcattgtatcttttctggaaataacaaattagccaaa
tatatgctcagaagaggggcaattccgtcaattaaagatgggggtgggcagggtgcccta
gagagagccatggagatgggagcgattactgatgatgagctactaatattgctttctgat
gggaagtga
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