Lactuca sativa (garden lettuce): 111909093
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Entry
111909093 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111909093
KO
K19022
AP-5 complex subunit beta-1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111909093
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
111909093
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
111909093
NCBI-ProteinID:
XP_023760650
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Position
3:complement(46967825..46971611)
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AA seq
1129 aa
AA seq
DB search
MENNPAPAPAPTPLKPLTPPEWESLIDDHQYGGYRRDRWISLNYTGISLIDLCLSSISRK
DLPLNLKLHLIVFLEEYFTSFFPSPESDTETENTLARFLETLRSVINSPVDGVSITYSLK
EQLLVSTTSIFILSTIDNSEDSKTPCLTYTSQLEGLIEVLLTVVNRPNHGVDRQLRGSAC
ECLRELERECPSLLSETAGHLWTLCQSEKTHVAQSYVLMLASVVHGIVISKVNVSILTTS
IPLIPFNVPQFLIGGGSTRENSVLPIKELRRVMSFLLEWPPFLTPFGLFEFMSIIMPVAV
ALELQASLLKVQFSGLLYTFDMLLCHAFLGMYLKFPEAFSGQENEVISRLLLISRETQHV
LVFRVLALHWLLGFMGIVMSTRKVIKEKIFATALKFYPSVFDPLALKALKLDLIAYCSIL
LDMSRVADANGNGQMVSDVPVVKLFEDGLESVSGFKWLPPWSTETSVAFRMFHKLLIGAS
SHSDNGSSTRTLMESTIFHASERMLVSMTLNSQGLIPVIVAFVNRLLRCHKHHVFGERLL
QTFNNHLLPKVKVDYRLGSYFPLFEKIAENETVPPGGLLELYGKYMRILVQKHGPDTGLR
SWSQGSKVLVLCRTILMHHQSSRFFLGLSRLLAFTCLHFPDLEVRDNARIYLRMLLCVPG
NKLRHLLTTGDQLPGIPPSSHSTSFFNIQSPKLSLDSKKSKHISSYIHLDRVKPLLVKQS
WSLSLSSFNISNNNNLEVIRDNDTSSWQPETPNSINNNNTDNTPIIPAIEGPNEPLRVTD
SKVSEIVEILRRHFSSIPDFRHMEGIKIVISCNLSFQSEAFNRIWGGPEPDLLPALYATV
LKFSSSAPYGSIQPYRIPFLLGGPTKKNTPDSLEIVPAGNGHIKEDDNFKSPVLIELQPQ
EPTPGLIDVSIESNTENGQIMCGHLHSVTVGIEDMFLNAIVPEDVDKDSIPGYYIDLFNA
LWEACGSSSSTGRETFPVKGGRGVAAVNGTRSVKFLEIPARELVRGVERNLARFVVNVVG
DSLIDVVKDGGVLSDVVLKDSGDLDVVVADLNVSEGPLYLEYGENGNENGGYLNKRKMGC
FYVLIFLPPMYHLLFQMEVGVGSTLVRIRTDHWPCLAYIDDYLEALFLA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaatccggctccggctccggcgccgacaccactgaaaccactgacgccgcca
gagtgggagtctttaatcgacgaccaccagtacggtggataccgccgtgaccgctggatt
tcattgaactacaccggtatctctctcatcgacctctgtctatcatccatctcccgcaaa
gatctcccactcaacctcaagctacacctcatcgtcttccttgaagaatacttcacctcg
ttttttccatcgccggaatccgataccgaaacggaaaacaccctagctcgcttcctcgaa
acacttcgctccgtcatcaattctccggtcgacggcgtttcaatcacttattccctcaaa
gaacagctactcgtatcaactacatctatattcatactttctaccatcgataacagcgag
gatagtaaaaccccttgtttgacttacacaagtcaactcgagggtttgattgaggtgttg
ttgacggttgtaaaccgcccaaatcatggtgtagatcgacagctacgtggttccgcatgc
gagtgtttgcgtgaattagagagagaatgccctagcttgttatcagaaacagctggacat
ctgtggacattatgtcaaagcgagaaaactcatgttgctcaaagctatgtattgatgcta
gcaagtgtcgttcatggaatagtgatctcgaaggtaaacgtttcaattcttacaacttca
attccgttgataccattcaatgttccccagtttttgatcggaggaggttcaaccagagag
aattctgttttaccgattaaggaattgaggagggtaatgtctttcttgcttgaatggcct
ccatttttgacaccttttgggttatttgagttcatgtccattataatgccggtggctgta
gcattggagttgcaggcttcattgttgaaggtgcagttttctgggttactttacacattc
gatatgctgctatgccacgcatttctaggaatgtatttgaaattccccgaagcttttagt
ggacaagaaaatgaagttatcagccgtttgttgctaatttcaagggaaacacaacatgtt
ttggtcttcagagtgcttgcacttcactggttattgggtttcatgggaatagtgatgtca
acaagaaaggtcattaaagagaaaatctttgcaacagctttaaaattttacccaagtgta
ttcgatccacttgctttgaaggctttgaagcttgatttgattgcatattgttcaatttta
ctcgacatgtcaagagtggcagatgcaaatggtaatggtcagatggtttctgatgtccct
gtagtgaagctatttgaagatggtcttgaatctgtgtctggtttcaaatggttgccacca
tggagcactgaaacttcagttgcattcaggatgtttcataaacttttgataggagcatct
tctcattctgataatggttcttccaccagaactctcatggaatccacaatcttccatgct
tcagagaggatgttagtgtccatgacactaaactctcagggattgattcctgtgattgta
gcttttgtgaaccgattgctgaggtgtcataagcaccatgtgtttggagaacgtctgctt
caaacattcaacaatcatttgcttccaaaggtcaaagtagactatcgattgggatcttat
ttcccactttttgaaaaaattgctgaaaatgaaacagttccaccaggtggattgcttgag
ctttatggtaaatacatgcgtattttagttcaaaaacatggcccagatacaggattaaga
tcatggtctcaaggaagtaaagttcttgttctttgtagaacaatattgatgcatcaccaa
agctctcgattctttcttgggttatctcgtcttcttgctttcacctgcttacattttcca
gatcttgaagtccgtgacaatgcaagaatatacttgcggatgctactctgtgtgccagga
aacaagctcagacacttgctaacaaccggggatcaactccctggaattccaccatcttct
cattccacctcattcttcaacatccaatctccaaaattgtctttggattccaaaaaatca
aaacatatttcatcctacatccaccttgaccgagtcaaacccctattagtcaaacaatct
tggtccttatctttatcatctttcaacattagtaacaacaacaatcttgaagtcatcaga
gacaatgacacctcatcatggcaaccagaaaccccaaatagtattaataataataatacc
gataataccccaatcattcctgcaatcgaaggcccaaatgaaccccttcgtgtgaccgat
tcaaaagtttcagaaatcgttgaaatcttgagaagacacttctcttcaatccctgatttc
agacacatggaagggatcaaaatcgtaatatcatgtaacttaagcttccaatcagaagcc
tttaatcgaatatggggtgggcccgaacccgatttgcttcccgcattatatgcaactgtc
ctcaagttctcatcttcagctccatacgggtcgatccaaccataccgcataccatttctc
ctcgggggacccaccaaaaagaatacacctgattccctagaaatcgtgccagctggcaac
gggcatataaaagaagatgacaacttcaaatcacccgttttgattgaattgcagccacaa
gaaccgacaccgggactcatcgatgtgtcgatagaatcgaacacggaaaacggtcagatc
atgtgtggtcacctccatagtgttaccgtggggatcgaggacatgtttttgaacgcgatt
gtccccgaagatgttgataaagattcgatacccgggtattacatagatttgtttaatgcg
ttatgggaggcatgcgggagttcatcgagcactgggcgggagacttttccggtgaagggc
ggcagaggtgttgccgccgtgaacgggacacggtccgtgaagtttcttgaaattccggcg
agggaacttgttcgaggtgttgaacggaatttagcgcgttttgttgtgaatgttgttggg
gattcgcttattgatgttgtgaaggatggaggggttttaagtgatgtggttttgaaagat
tccggtgaccttgatgttgtggtggcggatttgaatgtgagtgagggcccactttatttg
gagtatggtgaaaatggaaatgaaaatgggggttatttgaataaaagaaaaatggggtgt
ttttatgtattgatatttcttcctccgatgtatcatcttttatttcaaatggaagttggg
gttggatcgactttggttaggattagaacagatcattggccgtgtcttgcttatattgat
gattatttggaagctttgtttcttgcttag
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