Lactuca sativa (garden lettuce): 111909136
Help
Entry
111909136 CDS
T05352
Name
(RefSeq) golgin candidate 5 isoform X1
KO
K20286
TATA element modulatory factor
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111909136
Membrane trafficking [BR:
lsv04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111909136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
111909136
NCBI-ProteinID:
XP_023760693
LinkDB
All DBs
Position
1:42262021..42271683
Genome browser
AA seq
963 aa
AA seq
DB search
MAWFSGKVSLGNFPDLAGAVNKLSESVKNIEKNFDSALGFEDKAGGGPSSTSSTEASGLW
PSDLMAFMGQKGEDGAAESMEVLQTSSPQHSSSSKEKEGTEADNSADSINKHYQSIREEN
AESLKPEEHEDHHEGTNIEALKEANITAEKSMETNIDMHEHADVSDKPLETNIAISEEAE
NIGEKSAATNVTISDDPQPGSIQNPVLSRDSSEAGPLEKSESIQDESTSFSDQVVIASEL
NEVHSAPDLQKDDDGPKTESADTSQEVSAVEVVKPLYDGQTGSETLETTEVAEEGQLHSL
QSSDDVAAVLVPEVVSKEDNTNADVHIKEQHPISESNSSNNADSKVELEKVTREMKMMET
ALLGAARQAQAKADEIARLLNENEQLKSIIEDQKRKPNEADIESLREEYHQRVSTLERKV
YALTKERDTLRREQNKKSDAAALLKEKDEIITQIMAEGEGLSKKQAAQESQIRKLRAQIR
EFEEEKKGLMAKLQVEENKVESIKRDKAATEKLLQETIEKSQAELATQKEYYTNALNAAK
EAEALAEAQANTEARTELETRLREAQEREVMLVQTLEELRQTLSRSEQQAVFREDMLRRD
IEDLQKRYQESERRCEELVMQVPDSTRPLLRQIEAIQEATARRAEAWTAVERSLNSRLQE
AEAKSAAAEERERSVNERLSQTLSRVNVLEAQISCLRSEQTQLTRSLEKERQKAAESRQV
YLALKEEADTHEDHVNQLEEEIRELKRKHKQELQEALTHHELLQQDIEREKAARLELETT
ARLQSSIVPEQSPIARTKSSYENGLSRRLSNASSLGSMEESFYLQASLDSSDSLSERRNP
IEPTMSSYYLKSVTPNAFEAALRHKEGELASYMSRLASMESIRDSLAEELVKLTEECEKL
RSEVSVLPGLKAELEALRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNMLVNKI
AAS
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcttggtttagtgggaaggtctcgttagggaacttcccggatttagctggagcagtt
aacaagctcagtgagagcgttaagaacattgagaagaattttgacagtgcccttggattt
gaagacaaggctggtggtggtcctagctccacttcctctactgaagcttcagggttatgg
ccttccgatttgatggcgtttatgggacagaaaggtgaggatggagctgctgagtccatg
gaagtacttcaaacttctagtcctcaacattcatcctcctctaaagaaaaggaagggact
gaggctgataattcagctgattctatcaacaaacattaccagtctattagagaagagaat
gcagaatctttaaagcctgaagagcatgaagatcaccatgagggaacaaatattgaagcc
ttgaaggaggctaatatcactgccgaaaaatctatggaaacaaatattgatatgcatgag
catgcagatgtttctgacaaacccctggaaaccaacattgcaatttctgaggaggcagaa
aacattggtgaaaaatctgcagcaacaaatgtgacaatatctgatgatccacaaccaggg
tcaatacagaatcctgttctcagcagggatagctcagaagctggacctttagaaaagtct
gaatcaatacaagatgaatcaacaagtttctcagaccaagttgtaattgcctctgaacta
aatgaagtgcactcagctcctgatttacaaaaagatgatgatggaccaaagacagagtca
gcagatacttcacaagaagtttctgcagttgaagtggtgaaacctttatatgatggccaa
actggatctgaaacacttgagacgactgaagttgctgaagaaggccaactgcattcatta
caaagttcagatgatgttgctgctgtattggttcctgaagtagtttcaaaggaagacaat
acaaatgctgatgttcatataaaggaacagcatccgatttcagaaagcaattcatctaac
aatgcagattctaaggtagaactggagaaggtgactagagagatgaaaatgatggagact
gcactcctaggggctgcgcgacaagctcaggcaaaagctgatgaaattgcaaggctattg
aacgagaatgagcaactaaagtctataattgaggatcagaagagaaaaccaaatgaagca
gatattgagtctctacgagaagagtatcatcaaagggtctcaactcttgaaagaaaggtt
tatgctctcacaaaggaaagggatacattacgtagagagcaaaataagaaaagtgatgct
gctgctcttctgaaagaaaaagatgaaataatcacccaaattatggcagaaggggaaggg
ctttcaaagaaacaagctgctcaagaatctcaaattaggaaacttcgggcacagatcagg
gagtttgaagaagagaagaaaggattgatggccaaactacaggttgaagagaataaggta
gagagcataaagagggataaagcagccacagagaaattactacaagaaacaatagaaaaa
agccaggctgaacttgcaacacaaaaagaatactatacaaatgcattaaatgcagccaaa
gaagctgaagcattagcagaagcacaagctaacactgaagccagaactgaattagagacc
cgtttaagggaggctcaagaacgtgaagttatgctagttcaaactctagaagagttaagg
caaactttaagcagatcggaacagcaggcggtttttagagaagatatgcttaggagagac
attgaggaccttcaaaaacgataccaagaaagtgagcgtagatgtgaagagttggtcatg
caagttcctgattccactagacctcttttgaggcaaatagaagccatacaggaagcaaca
gctagaagagcagaagcttggacagctgtcgagagatcactaaactcacgccttcaggaa
gcggaggccaaatctgcagctgcagaggaaagggaacgttctgtaaacgaacgcctgtcc
caaacattatctcgagtaaatgttcttgaagctcagatttcatgtttaagaagtgagcag
acgcaactcactaggtcacttgagaaggaaagacaaaaagcagcagaaagtcgacaggtg
tacttagcactaaaagaggaggcagatactcatgaagatcatgtgaatcaacttgaagaa
gagataagggaactcaagagaaagcacaagcaagagctccaagaagcattgacccaccat
gaacttcttcagcaggatatagaacgtgaaaaagccgcacgtttggaattagaaacgaca
gctcgccttcagtcttctattgttcctgaacaaagtccaatagctagaaccaaatcttcc
tatgaaaatggattaagtcgcagactttcaaatgctagcagtctaggcagcatggaggaa
agtttttatcttcaggcatctttggactcgtctgattctttatctgaaaggagaaatcct
atagagcctaccatgagctcttattatttaaagagtgtgacaccaaatgcttttgaagct
gccctacgtcataaggagggtgaacttgcatcttatatgtcaagattggcatccatggaa
tccattcgtgactctcttgctgaggagttggttaaattgacagaggagtgtgaaaagtta
aggtcagaagtgtctgtgctgcctggcttaaaagcagaactagaagcattaagacgaagg
cactctgctgcactggagttgatgggtgaacgagatgaggagcttgaagagcttcgtgct
gatattgtggacttgaaggagatgtacagagaacaagtaaacatgcttgtaaataagatc
gctgcttcatag
DBGET
integrated database retrieval system