Lactuca sativa (garden lettuce): 111909289
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Entry
111909289 CDS
T05352
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111909289
Enzymes [BR:
lsv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
111909289
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111909289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
MetW
DUF2226
Ubie_methyltran
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
111909289
NCBI-ProteinID:
XP_023760851
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Position
1:complement(5845127..5847067)
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AA seq
366 aa
AA seq
DB search
MLLQVTRSKPHQFLASTLGNLTKHFQSTTTNTMKEIKTKKHTNPSSPLNPDTKCSSSVKS
TPEIEKKYVHRVYDAIAPHFSATRFAKWPKVSAFLNNLPSGSVILDAGCGNGKYLGLNPN
CFFIGCDISAPLIQICSDRGHEVFVADAVNLPYRSSLADAAISIAVLHHLSTESRRKKAI
EELVRTVKKGGHVLITVWAVEQEDRSLLNKWTPLTDKYLEEWIGPGSPRIRSSSSVTLES
IPETEVSVSQEEEEFKDFGNLSLGEEGMESEFKEDRERERERQQEYFVPWHLPYHRAEVS
GASVGAVENGLARKDDQKGAIVYDRYYHVFGEGELERLVCGMKNAVIVDQFFDKSNWCVI
LQKTSC
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgctcttacaggttacacgatcgaaaccccatcaatttctagcttccactctaggtaat
cttacaaagcacttccaatctacaaccacaaatactatgaaagaaatcaaaacaaaaaaa
cacacaaatccgtcatcaccattgaatccagatacaaaatgttcttcgagtgtcaaatca
accccagaaatcgaaaagaaatatgttcatcgtgtatatgatgcaattgcacctcatttt
agtgcaacccggtttgcgaaatggcccaaagtttcagcctttttgaacaatttgccatcc
gggtctgtgattctagatgcaggatgtggtaatggcaagtatctcggtttgaatcccaat
tgtttcttcattggttgtgatataagcgcaccccttattcagatctgtagcgacagaggc
catgaggtttttgtagcagatgctgtgaatcttccataccgaagctcattagcagatgct
gcaatttcgattgcggttttgcatcatcttagtactgaaagtaggaggaagaaagccatt
gaagaactggttcgaactgtgaaaaagggtgggcatgttttgatcactgtttgggctgtc
gagcaagaagatagatctttactgaataagtggaccccacttacggataagtatttagaa
gaatggattggaccaggtagtccacggattcgtagctcttcttcagtcaccttagaaagc
attcctgaaactgaggtgagtgtttcacaggaagaagaggaatttaaagattttggtaat
ctgagtttaggggaagagggaatggaaagtgaatttaaagaagatagggaaagggaaaga
gaaaggcaacaggagtattttgtgccatggcatttgccttatcatagagcagaagtgagt
ggagcttctgtaggagcagtggagaatggtcttgcaaggaaagatgatcaaaagggtgca
atcgtctatgacagatattaccatgtgtttggtgaaggtgaacttgaaaggttggtttgt
ggcatgaagaatgcagttattgtggatcaattttttgacaagtctaactggtgtgtcatt
ctccagaaaacttcatgttag
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