Lactuca sativa (garden lettuce): 111909302
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Entry
111909302 CDS
T05352
Name
(RefSeq) SEC12-like protein 2
KO
K14003
prolactin regulatory element-binding protein
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111909302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111909302
Membrane trafficking [BR:
lsv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111909302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WDR55
Beta-prop_EML
Beta-prop_Vps41
EIF3I
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
KNTC1_N
WD40_like
PEP5_VPS11_N
VID27
Beta-prop_WDR75_1st
Cation_ATPase_C
Motif
Other DBs
NCBI-GeneID:
111909302
NCBI-ProteinID:
XP_023760872
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Position
1:5605356..5608106
Genome browser
AA seq
387 aa
AA seq
DB search
MGKSSHDADIGANCKKYGVPFYGASFVPRNALRSAETESKREDEVVGDGSNYVVFAGGGG
EGRSGIPNALVISLFDSASNSLSDQPVNKFGLDDELPYRMAVHPGGEGVICSLPKSCRWF
EWEASKKDDEFTLNLKQSEKVLYELEHIGQQLAVTFSHDGSLLAVGGEDGKLRAFKWPSM
EATIDIPDAHGSVKNLDFSPDGKFLVSVGSGGPGRVWDTSSSTNKASLPKENDEVFGFCK
FSHDSLNNEVLYVTAMRDRGGSIVKWNTTTWKRISSKYVVRDPISAFNVSDDGRFLAIGT
IQGDIFILNASNLRVQSVVKKAHLGLVTALAFSQDSRALASASLDSSARVTQIKETKNNG
FNISVILLLILLAAALYYAKTEGYLLL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagcagccatgatgcagacataggggcgaattgtaagaagtacggtgttcct
ttctatggtgcttccttcgtcccacgcaacgcgctcagatccgcggaaacagaatccaag
cgtgaagacgaggttgttggtgatggatctaactatgtggtttttgccggaggcggtggc
gaaggtcgaagtggaatccctaatgcgctcgtcatctccctatttgattccgcttccaat
tccctttcggaccaacccgtgaacaagtttgggcttgatgatgagcttccatatagaatg
gctgttcacccaggtggtgaaggtgttatatgttcattaccaaagagttgcagatggttc
gaatgggaagcaagcaagaaagatgatgagtttacattgaatctaaagcagtctgagaaa
gtcctatatgaattggaacatattggacaacagcttgcagttacttttagtcatgatggc
tctttacttgctgtaggtggtgaggatggtaagctgagggcattcaagtggcccagcatg
gaagcaactattgatatccctgatgctcatggctctgttaaaaatttggatttcagccct
gatggaaagtttttggtctctgtgggaagtggtggccctggtagagtttgggacacctca
tcatcaaccaataaagcttctttaccaaaagagaatgatgaagtttttgggttttgcaag
ttttcgcatgatagcttgaataacgaagttctgtatgtcactgcaatgcgagatcgagga
ggaagtattgttaagtggaatacaacaacatggaaacgaataagctcaaagtatgtagtg
agagacccgatttctgctttcaatgtatcagatgatgggaggtttcttgccataggtacc
attcaaggggacatatttatattgaatgctagtaatttgagggtgcagagtgtagtgaag
aaagcacatcttggccttgttacagccctagccttctcacaggattcaagagccctggcg
tctgcatctcttgattcaagtgcaagggtcacacaaatcaaagaaacaaaaaacaatgga
tttaacatatcggtcatactgttactcatattacttgcagcagctttatattatgcaaaa
acagaaggctatcttcttctctaa
DBGET
integrated database retrieval system