KEGG   Lactuca sativa (garden lettuce): 111909309
Entry
111909309         CDS       T05352                                 
Name
(RefSeq) cryptochrome-1 isoform X1
  KO
K12118  cryptochrome 1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    111909309
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase Cryptochrome_C
Other DBs
NCBI-GeneID: 111909309
NCBI-ProteinID: XP_023760879
LinkDB
Position
1:complement(4619059..4622886)
AA seq 671 aa
MSGGCSIVWFRRDLRVEDNPALTAGVRAGNVIAVYIWAPEEEGHYYPGRVSRWWLKQSLA
LLDSSLKNLGTSLVTKRSTDSVSSLLEIIKSTGATQLFFNHLYDPLSLVRDHRMKEILTS
NGISVRSFNADLLYEPWEVLDDEGRPFNTFTQFWDRCLSMPYDPESPQLPPKKIISGDLS
KCCSETLIFEDESEKGSNALLARAWSPGWSNADKALAAFINGPLLEYSKNRRKADSATTS
FLSPHLHFGELSVRKVFHLLRIKQVLWANEGNTTGEESVNLFLKSIGLREYSRYMSFNHP
YSHERPLLGHLKFFPWVIDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVASF
FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGREFDRIDNPQFEGYKFDP
NGEYVRRWLPELARLPTEWIHHPWDAPEYVLQAAGIELGSNYPLPIVKMDEAKARLQEAL
TQMWQHEASSRAILENGIEEGLGDSSETAPIAFPQDMEMEMDENTLRTNPTTTTIRHYED
QMVPSMTTSLFRGGEEESSSEIGNFREDSRAEVPINQGGDGDGEGQTVRTGNMQPPIDIT
RALRITDDLPADSSNSSSSSSRERDGGVVPVWSPSTSSFSETFVGEDSSYLQRRTQSHQL
INNWRRLSQTG
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtcgggtgggtgtagtatagtgtggtttaggagagatctgagggtagaagacaaccct
gctttgactgcaggtgttagggcaggaaacgtgatagcagtgtacatatgggcacctgaa
gaagaaggtcattattaccctggaagggtgtcgagatggtggctaaaacagagtttagct
ttattggattcgtctttgaaaaaccttggtacttctcttgttaccaagagatctactgat
agcgtttcttctcttcttgagattatcaaatcgactggtgctactcagctgtttttcaat
catttatatgatccgttgtctctggttagggatcacagaatgaaggagattttaacaagt
aatgggatatcagtgcgttcatttaacgcggatttattatatgaaccatgggaagttctt
gatgatgaaggtcgtccattcaatacatttacacaattttgggacaggtgtcttagcatg
ccttatgatcctgaatctccacaactcccaccaaaaaagataatctcaggtgatttatca
aagtgttgttcagaaacattaatatttgaggacgaatccgagaaaggaagcaatgcactt
ctagcccgggcatggtcaccgggctggagcaatgcggataaagccctggcggcttttatc
aacgggccacttcttgaatactccaaaaaccgtagaaaagccgatagtgccaccacatca
ttcctatctccccacctccattttggcgaactttctgtacgaaaagtcttccatttacta
cgaatcaaacaagtcctttgggccaacgaaggtaacaccacaggtgaagaaagcgtaaat
ctattccttaaatctattgggcttcgggaatattcaaggtacatgagttttaatcacccg
tatagtcatgaaaggcctcttttggggcatttgaagttttttccatgggtgatagacgag
gggtattttaaggcgtggagacagggtcgaacaggttacccgttagttgatgcgggtatg
agagagttatgggccactggttggctccatgataggatacgggtcgtggttgcgagcttt
tttgtcaaggttttacagttaccatggagatgggggatgaagtatttttgggatacactt
ttggatgcggatcttgaaagtgatgctttgggttggcagtatattacaggtactttaccc
gatggccgtgaatttgatcgtatcgataatccacagtttgagggctataaatttgacccg
aatggggaatacgtaagaagatggctaccggaacttgctagactaccgacggaatggatt
caccacccatgggatgcaccggaatacgtgcttcaagccgccggaatcgagctcggatcc
aactaccctctcccgattgtgaaaatggatgaggcaaaagcccgattacaagaagcgctt
actcaaatgtggcagcacgaagcgtcttctcgagcgattctggagaacgggatagaagaa
gggcttggagactcgtcggaaactgctccgattgctttccctcaagatatggagatggag
atggacgagaatacgctgagaacaaaccctacgaccaccacgatccgtcattacgaagac
caaatggttccgagtatgacgacgtcgttgtttaggggaggggaagaggaatcgtcttca
gaaattggaaattttagggaagatagcagggcggaagttccgattaatcaaggtggagat
ggagatggagagggtcaaacggtgagaactggtaatatgcagccaccgattgatatcacg
agggcgttgagaattacggatgatttgccggcggattcttccaacagttcgagttcaagt
tcgagggaaagagatggaggtgttgtgcctgtgtggtcgccttccacttctagtttttcg
gagacttttgttggtgaagatagctcatatttgcagaggcgtacgcaatctcatcaatta
atcaacaactggaggcggctttcgcaaaccgggtga

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