Lactuca sativa (garden lettuce): 111909357
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Entry
111909357 CDS
T05352
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111909357
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111909357
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
111909357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA_28
AAA_25
AAA_33
RsgA_GTPase
ABC2_membrane_3
DnaB_C
Motif
Other DBs
NCBI-GeneID:
111909357
NCBI-ProteinID:
XP_023760948
LinkDB
All DBs
Position
1:41849678..41858078
Genome browser
AA seq
1431 aa
AA seq
DB search
MDGSDIYKASSSIRLGSLRAASGKTPSLRSGSTSVWRNSGMDVFSRSSREEDDEEALKWA
SLEKLPTFDRLRKGLLFGSTGPSNEVDINNLGFEQRQHLLDRLVKVADEDNEKFLLKLRN
RIDRVGIDLPTIEVKYEHLTVEADVNTGSRALPSFINFHIDFIEGLLSMFRVLPNSKKHI
TILDDVSGVVKPSRMTLLLGPPSSGKTTLLLALGGKLAKELKTSGKVTYNGHELHEFVPE
RTAAYISQNDVHIGEMTVRETLAFSARCQGVGSRYEMLAELSRREKDANIKPDPDIDIYM
KAAATAGQEASVVTDYTLKLLGLDICADTMVGDQMIRGISGGQKKRVTTGEMIVGPSKVL
LMDEISTGLDSSTTFQIVKSLKQMLHILEGTAVISLLQPAPETYDLFDDIILLTDGKIVY
QGPREHVLEFFESMGFKCPERKGIADFLQEVTSKKDQQQYWMRRDHAYRFVTAKEFAEAY
QSFHVGRKMGQDIATAYDKTKSHPAALTTENYGLNKKELLKACTDREILLMKRNSFVYIF
KLFQLLVMSLITLTVFFRTEMHRRTTEDGGIYVGALFFGVVMIMFNGMSEISMTIAKLPV
YYKQRDYLFYPSWAYALPSWVIKIPVSFLEAAVWVILTYYVVGFDPNIARFFKQYLLLLL
VNQMSSGLFRFIGALGRNMIVANTFGSFALLLVFALGGFVLVREDVKKWWLWGYWSSPMM
YAMNGIAVNEFLGNQWKQPLNGTTLGKIIITSGGFYAEAYWYWIAIAALVGFILVFNLCF
ALSLAILGPFGKTQSNAAQADSDTEVELSAMTTGNDATQTKKKGMILPFEPHSITFNDVK
YSVDMPQEMKEQGVSEDRLLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY
IEGDVRISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLATDVNENTRKSF
VDEVMDLVELNPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA
AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQELYVGPVGRHSCELIK
YFEDVNGVSKIKDGYNPATWMLEVSTSAQEIALGVDFTEIYRNSDLYRRNKALIAELSVP
RPGTNDLYFPTQYSQSFLVQCMACLWKQRWSYWRNPPYTAVRFVFTTFIAIIFGTMFWDL
GSKKTTQRDLINAMGSMYAATLFLGVQNASAVQPVVDVERTVFYRERAAGMYSALPYAFA
QVLVEVPYVFAQSAVYSVIVYAMIGFDWTAAKFFWYLFFQFCCLLYMTYYGMMTVAITPN
ANIAAIIAASFYGLFNLFSGFIIPRPRIPVWWRWYYWGNPLAWTLYGMVASQFGDFDTEL
TSGETVKGYLRRYFGFKHDFLGAIAGVHIGLVLFFAFIFAYSIRSFNFQKR
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggacgggagtgatatatacaaagctagtagtagtataaggttagggagtttaagggca
gcaagtggaaaaacaccaagtttaagatctggaagtacttctgtatggaggaattctggt
atggatgtgttctcgagatcttctcgtgaagaagatgacgaagaggctcttaaatgggct
tcacttgagaagctaccgacttttgatcgattgaggaaaggtttgctgtttggatcaaca
ggaccttccaatgaagttgatatcaataatcttggatttgaacagagacaacatttactt
gatagacttgtgaaggtggcggatgaagataacgagaagttcttgttgaagctcaggaac
agaattgacagagttgggattgatttgccaacaattgaagtcaaatatgaacatttgact
gtggaggcagatgtcaacacaggaagcagagctttacctagtttcattaacttccacatt
gatttcattgaggggttattgagcatgttccgtgtacttccgaattcaaaaaagcatata
actatccttgatgatgttagtggtgttgttaaacctagcagaatgacattacttttgggt
cctccaagttccgggaagacaacactcttgttagccttgggtgggaaacttgcaaaggag
cttaagacctcggggaaagtgacatataacgggcatgaattgcatgagtttgtacccgaa
agaacggctgcttatatcagtcaaaacgatgttcatattggagaaatgactgtcagagaa
accttggctttctcagcaagatgccaaggggttggatcacgttatgagatgttggcggag
ttgtcaagaagagaaaaagacgcaaatattaagcctgatcctgacatcgatatttacatg
aaggctgctgcaacagcaggacaagaagctagtgtggtcacagattatactctcaagtta
ttggggttggacatctgtgctgataccatggttggggaccaaatgataaggggtatctct
ggtggacaaaagaagcgtgtcacaacaggtgaaatgattgtggggccatcaaaggttctt
ctcatggacgagatatctactggtttggacagttctacaactttccaaatcgtgaaatct
cttaagcagatgctacacattctagaaggaacagccgtcatttctctccttcagccggca
cccgaaacatatgacttgttcgatgacattatcctcctgactgatggaaagattgtgtat
caaggcccacgtgaacatgtgctcgagtttttcgaatctatggggttcaaatgccccgag
aggaaaggcattgctgatttcttgcaagaagttacatcaaagaaagatcaacagcagtat
tggatgagaagagaccatgcttatagatttgtgactgctaaagaatttgctgaggcgtac
caatcctttcatgttggaagaaaaatgggacaagatattgcgacagcttatgacaaaaca
aaaagccaccctgctgctctcacaactgaaaattacggtttaaacaaaaaggagctcttg
aaggcttgtactgatagagaaatattgctcatgaagagaaattcatttgtttatatcttc
aagttattccagctacttgtgatgtcgctcatcactttgactgtgtttttccgaaccgag
atgcataggcgtacaactgaagatggtgggatatatgtgggtgctcttttctttggtgtt
gttatgatcatgtttaatgggatgtctgaaatatcaatgacaattgcaaagcttcctgta
tactacaaacaaagagactacctgttttacccttcatgggcgtatgctttaccctcatgg
gttatcaagattcctgtttcgtttcttgaagctgctgtttgggtgattctcacttattac
gtagtgggtttcgatcctaatattgcaagattcttcaagcaatatcttctgcttttgctc
gttaaccaaatgtcttcaggattgtttcgtttcattggagcgttgggtcgaaatatgatt
gtggcaaacacatttggttcattcgcacttctcttagtctttgctttgggtggctttgtt
cttgttcgagaggatgtaaagaagtggtggttgtggggatactggtcatcccctatgatg
tacgccatgaatggaattgctgtgaacgagtttcttgggaatcaatggaaacaaccattg
aatggtaccacattagggaaaattattatcacatctggagggttctatgcggaagcttat
tggtattggattgcaattgcggccttggtgggattcattcttgtcttcaacctgtgtttt
gctttgtctctggctatccttggcccatttgggaaaactcagtcgaatgcagcacaggcg
gatagtgacacagaagttgaattgtcagccatgacaaccggaaatgatgccactcagacc
aagaagaaagggatgattcttccatttgaaccacattcaatcacctttaatgatgtcaaa
tactctgttgatatgccacaggaaatgaaagagcaaggggtgagtgaagacagattactg
ctacttaaaggtgtgagtggagctttccgacctggtgttcttacagctctgatgggagtc
agtggtgctggaaaaacaactctgatggatgttttggctggaagaaaaaccggtggttat
attgaaggtgatgttaggatttccgggtatccaaagaaacaagaaacttttgctcgaatc
tccggttactgtgagcaaaacgacatccactcgccacatgtcactgtttatgagtctttg
ctctattcagcctggttaaggctggctacagatgttaatgaaaatacccgaaagagtttt
gtggatgaggttatggatctggtggagctgaacccattaagagacgcgttggtcgggttg
ccaggtgtcaatgggctatcgactgaacaaagaaagcggttgactattgctgttgagctt
gtagccaatccgtctataatcttcatggatgagccaacttcagggcttgatgctcgagct
gctgctattgtcatgagaactgttaggaacactgtcgacacaggaagaacagtcgtctgc
accattcatcaacccagcattgatatctttgaagcttttgacgagttgttcttgatgaaa
cgaggaggacaagaattatacgtgggacctgtgggtcgccattcttgtgagttgatcaag
tatttcgaggatgtgaatggggtaagtaagataaaagacggatacaaccctgcgacatgg
atgttggaagtcagtacctcagcgcaagaaattgctttaggagtggatttcacagaaatc
tacaggaactcagatctttacaggagaaacaaagcacttatcgctgaattaagcgtccca
cgtcccggaacaaacgatctgtatttcccgacacaatactcgcagtcattccttgttcaa
tgtatggcttgcctgtggaaacaacgttggtcgtactggagaaacccgccttacactgct
gtccgtttcgtcttcaccaccttcattgccatcatattcggtaccatgttctgggatctc
ggtagcaaaaagacgacccaacgggatctgataaacgcaatgggctcaatgtacgccgca
accctcttcctcggagtccaaaacgcatcggcggtgcaaccagttgtagacgtagaacgc
accgtcttttacagagaacgagcagccggaatgtattccgctttgccatacgcctttgct
caggttctggttgaagtcccttacgtttttgcacaaagcgcggtgtacagtgttatagtg
tacgccatgattgggtttgattggacagcagccaagttcttctggtacttgttcttccag
ttctgctgtttactctacatgacttactacggtatgatgacggtcgccattactcccaac
gccaacatcgctgcaatcatcgccgcctcgttttatggactcttcaatctcttttcagga
ttcattatcccacgacccaggattccggtgtggtggagatggtactactgggggaaccca
ttggcctggaccctttacggcatggttgcatcgcagtttggcgacttcgacaccgagctt
actagtggtgagaccgtgaaaggttacttgcgtcggtattttggtttcaagcatgatttc
ctgggcgccatcgctggagtgcatatcggactggttttgtttttcgcgtttatctttgcg
tactccatcagatccttcaatttccagaagagataa
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