Lactuca sativa (garden lettuce): 111909435
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Entry
111909435 CDS
T05352
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111909435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111909435
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
111909435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_28
AAA_25
AAA_33
RsgA_GTPase
DnaB_C
Motif
Other DBs
NCBI-GeneID:
111909435
NCBI-ProteinID:
XP_023761023
LinkDB
All DBs
Position
1:complement(41680306..41690686)
Genome browser
AA seq
1431 aa
AA seq
DB search
MDGGDIYKASSSIRLASLRATSGRTSSLRSGSTSVWRNSGMDVFSRSSREEDDEEALKWA
SLEKLPTFDRLRKGLLFGSTGPSNEVDVNDLGFEQRQHLLDRLVRVADEDNEKFLLKLRH
RIDRVGIDLPTIEVKFEHLTVEADVNTGSRALPSFINFHIDFFEGFLSMFHLLPNSKKHI
TILDDVSGVVKPSRMTLLLGPPSSGKTTLLLALGGKLAKELKNSGKVTYNGHELHEFVPE
RTAAYISQNDVHIGEMTVRETLAFSARCQGVGSRYEMLAELSRREKDANIKPDPDIDIYM
KAAAVAGQEASVVTDYTLKLLGLDICADTMVGDQMVRGISGGQKKRVTTGEMIVGPSKVL
LMDEISTGLDSSTTFQIVKSLKQMLHILEGTAVISLLQPAPETYDLFDDIILLTDGKIVY
QGPREHVLEFFESLGFKCPERKGVADFLQEVTSKKDQKQYWMRREQPYRFVTAKEFAEAY
ESFHVGRKMREDITTIYDKTKSHPAALTTEKYGLNKKELLKACVDREILLMKRNSFIYIF
KLFQLLVLSFITLTLFFRTEMHRRTTEDGGIYVGALFFGIIMITFNGLSEISMTIAKLPV
YYKQRDYLFYPSWSYALPAWIVKIPISFIEAALWTILTYYVVGFDPNIARFFKQYLILLL
VNQMSSGMFRFIGALGRNMIVANTFGSFALLLIFALGGFVIVREDVKKWWLWGYWSSPLM
YAMNGIVVNEFLGHQWKAPLNGTTLGKIIITSGGFYAEAYWYWISIAALLGFILVLNLCF
ALSLAILGPFGKSQSNAAHADNDTEVELSAMTTGDDATHTKKKGMILPFEPHSMTFNDVK
YSVDMPQEMKEQGVSEDRLLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY
IEGDVRISGYPKKQETFARISGYCEQNDIHSPQVTVYESLLYSAWLRLATDVDEQTRKSF
VDEVMDLVELNPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA
AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQELYVGPVGRHSCELIK
YFEDINGISKIKDGYNPATWMLEVSASAQEMALGVDFTEIYQNSDLYRRNKALIAELSVP
RPGTNDLYFPTQYSQSFLVQCMACLWKQRLSYWRNPPYTAVRFAFTTFIAVMFGTMFWDL
GSKKNTQRELTNAIGSIYAATLFLAIQNASAVQPVVDIERTVFYRERAAGMYSALPYALA
QVLVEIPYVFAQSAVYSIIVYAMIGFDWTAAKFFWYLFFQFCSLLYMTYYGMMTVAITPN
ANIAAIIAASFYGLFNVFSGFVIPRPRIPVWWRWYYWGNPLAWTLYGMVISQFGDFDDRL
TSGETVKGYLRRYFGYKHDFLPAIAGVHIGLVLFFGFIFAYCIRAFNFQKR
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggatgggggtgatatatataaagctagtagtagtataaggttagcgagtttaagggca
acgagtggaagaacatcgagtttaagatctggaagtacttctgtatggaggaattctggc
atggatgtgttttcgagatcttctcgtgaagaagatgatgaagaggctcttaaatgggct
tcacttgagaagctaccgacttttgatcgattaaggaaaggtttgctgtttggatcaaca
ggaccttctaatgaagttgatgtcaatgatcttggatttgaacagagacagcatttgctt
gacagactagtgagggtggctgatgaagataatgagaagttcttgttgaagctcaggcac
agaattgaccgggttgggattgatttgccaacaattgaagtcaaatttgaacatttgacc
gtggaggcagatgttaacacaggcagcagagctttaccaagtttcattaactttcacatt
gatttttttgaggggttcttgagcatgttccatctacttccgaattcgaaaaagcatata
actatccttgatgatgttagtggtgttgttaaacctagcagaatgacattacttttgggt
cctccaagctcggggaagacaacgctcttgttagccttgggtgggaagctcgcaaaggag
cttaagaactcgggaaaggtgacatataacgggcatgaattgcatgagtttgtacccgaa
agaacggctgcttatatcagtcaaaacgatgttcatattggagaaatgactgtcagagaa
accttggctttctcagcaagatgccaaggggttggatcacgttacgagatgttggcagag
ttgtcaagaagagaaaaagacgcaaatattaaacccgatcctgacatcgatatctacatg
aaggctgcagcagtagcaggacaagaagctagtgtggtaacagattatactctcaagtta
ttggggttggacatctgtgctgatacgatggttggggatcaaatggtaaggggtatttcc
ggtggccaaaagaagcgtgtgacaacaggtgaaatgattgtgggaccatcaaaggttctt
cttatggacgagatatctactggtttggatagttctacaactttccaaatcgtgaaatca
cttaagcagatgctacacattctagaaggaacagccgtcatttctctccttcagccggca
cccgaaacatatgacttgttcgatgacatcattctcttgactgatgggaagatcgtgtat
caaggcccacgtgaacatgtgctcgagtttttcgaatctttgggattcaaatgccccgag
aggaaaggggttgctgatttcttgcaggaagtgacatcaaagaaagatcaaaagcaatac
tggatgagaagagagcagccttataggtttgtgacagctaaagaatttgctgaggcttac
gaatcgtttcatgttggaaggaaaatgagagaagatattacgacaatttatgacaaaaca
aaaagccaccctgctgcgcttacaaccgaaaaatacggtttaaataaaaaggagctcttg
aaggcttgtgtcgatagagaaatattgctcatgaagagaaattctttcatttatatcttc
aagttattccaactacttgtgttgtcgttcatcactttgactctgtttttccgaaccgag
atgcatagacgtactaccgaagatggggggatatatgtgggtgctcttttctttggtatt
attatgatcacctttaatgggttgtctgaaatatcaatgacaattgcaaagcttcccgta
tactacaaacaaagggactacctattttacccttcgtggtcttatgctctgcccgcctgg
atcgtcaagattcccatttcttttatcgaagctgctctttggacgattctcacatattat
gtagtggggttcgatcctaatatcgcaagattcttcaagcagtaccttattctgttgctt
gttaaccagatgtcttctggaatgtttcggttcattggagcattgggtcgaaatatgatt
gttgcaaacacatttggttcattcgcgctacttttaatctttgctttgggtggctttgtt
attgttagagaggatgtaaagaaatggtggttgtggggttactggtcatccccactgatg
tacgccatgaacggaattgttgtgaacgaatttcttgggcatcaatggaaagcaccattg
aatggcaccacattaggaaaaattattatcacatctggagggttctatgcggaagcttat
tggtactggatttcaatcgcggccttgttgggattcattcttgtcttgaacttgtgtttt
gctttgtctctggctatccttggcccattcgggaaaagtcagtccaatgcagcacatgct
gataatgacacagaagttgaattgtcagccatgacaacaggagatgatgccactcacacc
aagaagaaaggaatgatccttccatttgaaccacattcaatgacctttaatgatgtcaaa
tactctgttgatatgccacaggaaatgaaagagcaaggggtgagtgaagacagattactg
ctgcttaaaggtgtgagtggagctttccgacctggtgttcttacagctctgatgggagtc
agtggtgctggaaaaacaactctgatggatgttttggctggaagaaaaaccggtggttat
attgaaggtgatgttaggatttccggttatccaaagaaacaagaaacttttgcccgaatt
tctggttactgtgagcaaaacgacatccactcgcctcaagtgaccgtttacgagtctttg
ctttattctgcctggctaaggctggctacagatgttgacgagcaaacccgaaagagtttt
gttgatgaggttatggatctggtggagctgaacccattaagagacgcgttggtcgggttg
ccaggtgtcaatgggctatcgactgaacaaagaaagcggttgactattgctgttgagctt
gtagccaatccgtctataatcttcatggatgagccaacttcaggacttgatgctcgagct
gctgctattgtcatgagaactgttaggaacactgtcgacacaggaagaacagttgtgtgc
accattcatcaacccagcatcgatatctttgaagcttttgatgagttgttcttaatgaaa
cgaggaggacaagaattatacgtaggacctgtcggtcgccattcttgtgagttgatcaag
tatttcgaggatattaatgggataagtaagataaaagacggatataaccctgcgacatgg
atgttggaggtcagtgcttcagcacaagaaatggctttaggggtcgatttcaccgaaatc
taccagaactcggatctttacaggagaaacaaagcacttatcgctgaattaagcgtccca
cgtcccggaacaaacgatctgtatttcccgacacaatactcgcagtcattccttgttcaa
tgtatggcttgtttatggaaacaacgtttgtcctactggagaaaccctccttacactgct
gttcgttttgccttcaccaccttcatcgccgtcatgttcggtaccatgttctgggatctc
ggtagcaaaaagaacacccaacgggagttaactaacgcaataggttcaatttatgcggca
accctcttcctggctatccaaaacgcatcggcggtgcaaccagttgtagatatcgaacgc
actgtattttacagagaacgagctgccggaatgtattctgctttgccatacgccttagct
caggttctggttgaaatcccatacgttttcgcacaaagtgcagtgtatagtattatagtg
tacgccatgattggattcgactggacagcagccaagttcttctggtacttgttcttccag
ttctgctctttactctacatgacatattacggtatgatgacggtcgccattacgccaaat
gccaacatcgctgccatcatcgctgcctcgttttacggacttttcaacgtcttttcagga
ttcgtcattccaagacccaggattccggtgtggtggagatggtactattgggggaaccca
ttggcctggaccctctacggaatggttatatctcagtttggggacttcgacgacaggctt
acgagtggtgagacagtgaaaggttacttgcgtcggtattttggttacaagcatgatttc
ctgcccgccatcgccggagtgcatattggactggttctgtttttcgggttcatctttgcc
tactgcattagagccttcaatttccaaaaaagataa
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