KEGG   Lactuca sativa (garden lettuce): 111909454
Entry
111909454         CDS       T05352                                 
Name
(RefSeq) ras-related protein RABE1c
  KO
K07901  Ras-related protein Rab-8A
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111909454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111909454
   03036 Chromosome and associated proteins [BR:lsv03036]
    111909454
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111909454
   04031 GTP-binding proteins [BR:lsv04031]
    111909454
Membrane trafficking [BR:lsv04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    111909454
 Autophagy
  Other autophagy associated proteins
    111909454
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    111909454
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111909454
  Exosomal proteins of other body fluids (saliva and urine)
   111909454
  Exosomal proteins of colorectal cancer cells
   111909454
GTP-binding proteins [BR:lsv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    111909454
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_29 C2c1_Nuc-II AAA_22 DUF3963
Other DBs
NCBI-GeneID: 111909454
NCBI-ProteinID: XP_023761049
LinkDB
Position
8:115507243..115510205
AA seq 216 aa
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIAKDIKQR
LSDTDSKAEPSTIKINQPDATAGNGQLGQKSACCGS
NT seq 651 nt   +upstreamnt  +downstreamnt
atggctgctccaccagcaagggcacgagcagattatgattaccttattaagctccttctg
atcggtgatagcggtgtgggtaaaagttgccttcttttgcgtttttctgatggttctttc
accactagtttcatcactacaattggtattgatttcaagataagaaccgttgaactcgat
ggcaaacggatcaaactccaaatttgggacacagctggtcaagaacgattccgaaccatc
acaacagcttactacaggggtgctatgggaattttattggtgtatgatgttactgacgaa
tcatctttcaacaacataagaaactggattcgcaacattgaacaacatgcttcagacaat
gttaacaagattcttgttgggaataaagctgatatggatgaaagcaaaagggctgttccg
actgcaaagggtcaagctcttgcggatgaatatggcattaagttttttgaaactagtgca
aaaacgaacctaaatgtggagcaagttttcttttcaatagcgaaggatatcaagcaaagg
ctttcagatactgattccaaggcggagccatcaactattaaaattaatcaaccagatgca
acagctgggaatggtcaacttggacagaaatcagcttgctgtggctcttaa

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