Lactuca sativa (garden lettuce): 111909455
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Entry
111909455 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111909455
KO
K24755
WD repeat-containing protein 76
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111909455
03036 Chromosome and associated proteins [BR:
lsv03036
]
111909455
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111909455
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111909455
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111909455
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
111909455
DSBR (double strand breaks repair)
Other DSBR factors
Others
111909455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
MIOS_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
DUF2415
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
111909455
NCBI-ProteinID:
XP_023761050
LinkDB
All DBs
Position
8:115512197..115514155
Genome browser
AA seq
474 aa
AA seq
DB search
MASQRLTEYERKRLENIKRNDELLASLKIHSKLADLSASAKRNREQTKSYKISPQKKAKS
ETPIVIRRSLRTQGKKPDSPGLADDFNESPKKQTTLKSQVTPDKSARELKPLLMRDVRVS
SELDEPFVRKILSVSKDSPSNGAKNGVGMRVTASIDLESMELMPENIARVVPNRILSVKF
FPSADMRMVVVGNKFGDVGFWNIDSETEDGDGIYMYRPHPAPVSSICIQPFSMNKIVTCS
YHGLIRTLDVKKEIFDLTYSTEDAIFSMSQRSDDVNSLYFGEGQGVLRVWDERSKSSSMA
WNLHDSRINTIDFSPANTNLMVTSSSDGSACIWDLRKLGKKSNPDSVKEIRRERAVHSAY
FSPSGNLLATTSLDDKIGVVSGANYDDEFLLYHYNQTGRWLSSFKGVWGWDDSYVFVGNM
KRGVDVISTEEKRIVTTLESPHMTAIPCRFDAHPLNPGMLAGATSGGQVYVWSL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcagagactcacggagtacgagcgtaaacgccttgaaaacatcaaacgcaac
gacgaactgctcgcgtctctcaagatccattccaagcttgccgatctatcagcatccgcc
aagcgtaacagggaacagactaaatcttacaaaattagtccacagaagaaagcaaaatcc
gaaaccccaattgtaatccgtagatctctaagaacccaaggaaaaaagccagattctcca
gggttagcagatgatttcaacgaatctcctaagaaacaaacaacactcaaatcacaagtc
acgcctgataaatccgctcgagaattgaagccgcttcttatgagagacgtgagggtttct
tctgagttggatgaaccatttgtcaggaagattctgagtgtatctaaggactcgccatca
aatggagcaaagaatggagttggaatgagggttacagcttcgattgatttggaatcgatg
gagttgatgccagagaatattgctcgtgttgtacctaacaggatactgtcagttaaattc
tttccgtctgcagatatgaggatggttgttgtggggaacaaatttggggatgtagggttt
tggaatatcgattcagaaactgaagatggcgatgggatttacatgtatcgtcctcatcca
gctcctgtttcatcgatttgtattcaacctttttcaatgaacaagatcgttacatgttct
taccatggtcttattcgcacattagatgtcaagaaggagatatttgatcttacttattcc
actgaagatgcgattttttcaatgtctcaaagatctgatgatgtaaactcgctatatttt
ggtgaaggccaaggagttcttcgtgtttgggatgaaagatctaagagctcatcaatggct
tggaacttgcatgattctaggatcaacaccatagattttagtccagcaaacaccaattta
atggtgacaagctcatcagatggaagtgcctgcatttgggatttgagaaaactcggtaaa
aaaagtaatcctgattctgtcaaagagattagacgtgagagggctgtacattctgcttac
ttctctccttcaggcaaccttcttgctacaacaagtcttgatgataagattggagtggta
agtggagcaaattatgatgatgagtttttgctatatcattacaatcagacgggtagatgg
ctttcttcattcaagggcgtgtggggatgggatgattcatatgtatttgtgggaaatatg
aagagaggggttgatgttatttctactgaagagaagagaattgttactactcttgagagt
cctcacatgactgcaataccatgtcgttttgatgcgcatcctttgaatcctggaatgctt
gctggggcgaccagtggtggccaggtttatgtatggagtttatag
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integrated database retrieval system
