Lactuca sativa (garden lettuce): 111909458
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Entry
111909458 CDS
T05352
Name
(RefSeq) transcription factor MYB48
KO
K09422
transcription factor MYB, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111909458
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
111909458
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
IQCJ-SCHIP1
GNT-I
DUF3683
Motif
Other DBs
NCBI-GeneID:
111909458
NCBI-ProteinID:
XP_023761053
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All DBs
Position
8:116111241..116113282
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AA seq
271 aa
AA seq
DB search
MVQEDETMRKGPWTEHEDYQLVFHVHMFGDRRWDFIANVSGLKRTGKSCRLRWVNYLHPG
LKRGKMAPHEERLVLELHSKFGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRTSL
SRSPSPSFSHSSSSSSICTSNPTIDSMPMIETKERSFYDTGGVEMFSVMKGKNKNNNNSF
KKAATRVSDSSEGHEGYCSMDDIWKDIDLDLLEDDHSIKPVFDPYSEIAVPSLTWEYNYC
SSTSWTFNGQEEFGKDMISLTSQQFSAGLTD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaagaagacgaaacgatgcgaaaaggtccatggacagaacatgaagattatcaa
ttggtatttcacgttcatatgtttggagatcgacgatgggacttcatagcaaatgtttca
ggtttgaaaagaacaggaaagagttgcagactgagatgggttaattatctgcatccaggt
ctcaaaagaggaaagatggcacctcatgaagagcggcttgttcttgaacttcattctaaa
tttggcaacaggtggtcaaaaattgcaagaaaactaccaggaagaactgataatgagatc
aagaactactggagaactcatatgcgaaagaaagctcaagagaagaaaagaacatcatta
tctcgatctccatctccatctttctcacacagttcgtcttcatcatcaatctgtaccagc
aatcctaccattgattccatgccaatgattgagaccaaagaacgaagtttttatgacact
gggggagtcgaaatgtttagtgttatgaaaggcaaaaacaagaacaacaataatagtttc
aagaaagctgctaccagggttagtgattctagtgaaggacacgaagggtattgctcaatg
gatgatatatggaaggatatagatttagatttattagaagatgatcatagtataaaacca
gtttttgatccttatagcgaaatagcagtaccttcacttacatgggaatataattactgt
tcgagcacttcgtggacgttcaatggccaagaagagttcggtaaagacatgatttcccta
acaagccaacaatttagcgcaggattaaccgactaa
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