Lactuca sativa (garden lettuce): 111909496
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Entry
111909496 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111909496 isoform X1
KO
K13137
serine-threonine kinase receptor-associated protein
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111909496
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
111909496
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
eIF2A
RMC1_N
Beta-prop_IP5PC_F
FlaF_Ig-like
Motif
Other DBs
NCBI-GeneID:
111909496
NCBI-ProteinID:
XP_023761086
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All DBs
Position
1:complement(41408924..41412075)
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AA seq
337 aa
AA seq
DB search
MDKKKVAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSTPMLRNGETGDWIGTFEGH
KGAVWSCCLDTNALRAASASADFTAKIWDALTGDELHSFDHKHIVRACSFSEDTHLLLTG
GFEKILRIFDLIRPDAPPREVEKSSPGSVRTVAWLHSDQTILSSCSDSGGVRLWDVRSGK
IVHTLETKSSVTSAEVSKDGRYITTADGSSVKFWDANHFGLVKSYDMPCTVESASLEPKF
GNKFIAGGEDMWIRLFDFNTGEEIAICKGHHGPVHSVRFSPGGESYASGSEDGTVRIWQT
QPPTPTAALNGPNKHSSPSPLEVVASKLEDLHVANKD
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagaaagtggctgtccctcttgtatgccatggtcattctcgcccggtggtg
gatttgttttacagcccgattactccagatgggtttttcctcatcagtgccagcaaggat
tccactcctatgcttagaaatggagagactggggactggattggaacttttgaggggcat
aaaggtgcagtgtggagttgctgtttggacactaatgcccttcgtgctgcttcagcatct
gctgatttcactgcgaaaatatgggatgcattaactggggatgaattgcactcgtttgac
cacaaacatattgttcgggcatgttccttctctgaggatacacatcttctactgacgggt
ggttttgagaagatacttcgcatatttgatttaattcgtccggatgcacccccacgggaa
gttgagaagtctagccctggatctgtaaggacagttgcatggcttcatagtgaccaaact
atattaagctcttgctctgattcaggtggtgtaaggctatgggatgtgagaagtggcaaa
attgtccatacactagaaacaaaatcatctgtaacaagtgctgaagtaagtaaagacgga
cgttatattacgactgcagatggatctagtgtcaagttctgggatgcaaatcattttgga
ctggtgaaaagctatgatatgccatgtactgtggaatcagcatcactggaaccaaagttt
ggtaataagtttattgctggaggggaagacatgtggattcgtctctttgattttaatact
ggcgaagagattgcaatttgcaaaggtcaccatggtccggtccattctgtacggttctca
ccgggaggtgaatcatacgcatccggctcagaagatggaaccgtaagaatatggcagaca
cagccacccacacccacagctgctttaaatggcccaaacaagcactcttcaccttcaccc
cttgaagtagttgcatcaaagttggaggatttacatgttgccaacaaagactaa
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