Lactuca sativa (garden lettuce): 111909683
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Entry
111909683 CDS
T05352
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111909683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111909683
03036 Chromosome and associated proteins [BR:
lsv03036
]
111909683
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
111909683
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
111909683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
111909683
NCBI-ProteinID:
XP_023761228
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All DBs
Position
2:complement(149512057..149519830)
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AA seq
1179 aa
AA seq
DB search
MDSSGTASDVARAIVAALGWSSSSDDRKSAMSYLESVKSGDVRVLASTSFLLVKKDWPSE
VRLHAFKLLQHLVRLRWEELSPEERREFAKVSMDLMNEIANSSGEWALKSQTAALIAEIV
RREGVSLWQELVPSLVALSNSGPTHAEMVCMMLRWLPEDITVHNEDLEGDRRRLLLRGLT
ESLPEILPLLYTLLERHFGAAMTEAGRQQLEVAKQHAATVTATLNAINAYAEWAPVPYLS
KYGTIHGCGFLLSSPDFRLHACEFFKLVSSRRRPADADSDFDSAMSSILVILMNVSTEFL
RVSETNSGIISDSDFEFAESICESLVSFGSTNLQCITGDSEILSLYLQKMVQYFRHYKIE
LHYQSLVFLLALVRDSLSKPKTVGDGSVDNLAPGSGQTDNHKRKILPFVNDEICSIMLDI
SFQRMLKKEKSNPGNELAVLELWSDDVEGMGDFGQYRAKLLELVRLIASFKPLITITKVS
DRIIMIIKSLLLSPLPSQNLTILESMQLAVENVLGAVFDGQNDENGSASDAQLASCRILE
GLLQQLLSLKWSEPELVEVLGHYLEALGPFLKYYPDAVESVIKKLFELLTSLPIAVKDPA
TSRSRHARLHICTAFIRLAKTADTRLLPHMKGIADMVSYLQKEGQLLRGEHNLFGESFLI
IASAAGPQQQQEVMTWLLEPLSSQWTQIEWQNMYLSDPSGLVKLCGETQFMWSLFHTVTF
FEKALKRSGVKKGNLNVNNSTPSHPLASHLPWMLPPLLKLLRAMHSLWSPSVTQLLPGEI
KSAMIMTDAERTSLLGESTKMPKGTITFTDGLQNTKDGNPEPNETDIRNWLKGIRDSGYN
VLGLSTTVGDSFFRCMDIEAIDLALVENIQSMEFRHIRQLVHSILIPLVKNCPSDLWDIW
LKRLMYPLLVYSHQALRISWSGLLDEGRAKVPDFNGVLGGSDLKVEVMEEKLLRGLTREI
STLLSVLGGPGLNPGLNSEQSSKDSNVVSTSLVGFLLKNKDIAVPMLSLCLDAFRWTDGE
STIKVASFCGAVVNLAMLTDNVELRQFVCKDLFSGIIQGLALESNAFTSADLVSLCREIF
VNFCKDDPTPRQILLSLPCITPQDLLAFEEALGKTSSLKEQKQLMRSLLLVGTGNQLKAL
AVQKSVNVITNVVARPRSSISASDSRTEDGGAIGLAAIM
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagtggtacagcgagcgatgttgcccgagctatcgtcgccgcccttggctgg
agctcttcgtccgacgatcgcaaatcggctatgtcgtacttagaatctgtaaaatctggg
gatgttcgtgttttggcaagcacatcatttcttttagtcaagaaagattggccttctgaa
gttcgtctgcatgcattcaaattattgcagcatctagtgcgactaagatgggaagaattg
agccctgaagaaagacgagaatttgcaaaagtttctatggatttaatgaacgaaattgca
aacagttctggagagtgggctctaaaaagtcaaacagctgctctaattgctgagatagtc
aggagagaaggcgtaagtctatggcaagaacttgttccatctctagtagctctttccaac
tctggccccacacatgctgagatggtgtgtatgatgctgaggtggcttcctgaagatatc
actgttcataacgaagacttagaaggtgatcgacgtagactgttgttacgtgggttaact
gaatctttgcctgaaatccttccattgttgtatacattattagaaagacactttggagct
gccatgactgaagcaggtaggcaacaacttgaagttgcaaagcagcatgcagctacagta
acagctactcttaatgccatcaatgcatatgctgaatgggccccagtgccttatctttca
aaatatggcacaatccatggttgtggctttctactatcttctcctgatttccgacttcat
gcgtgtgagtttttcaagctcgtgtcctctaggaggagacctgctgatgcagattctgat
tttgattctgcaatgagcagcattcttgtcatattgatgaatgtatctacagagttttta
cgggtatcagagacaaattctggcattattagtgatagtgactttgagtttgcagagtct
atatgtgaaagtttggtgtcttttggttctacaaacttgcaatgcatcactggtgatagt
gaaatactatctctctatttacaaaagatggtgcagtatttcagacattataagatcgag
cttcactatcagtcccttgtatttttactggcattagtgagagattcactctcgaagcca
aagacagttggagatgggtcagttgacaatcttgcccctggttcagggcagactgataat
cataaaagaaagatcttaccttttgtaaatgatgagatatgtagcatcatgttggatata
tcttttcagagaatgcttaaaaaagaaaaatctaaccctggaaatgaacttgctgtattg
gaattatggagtgatgacgtggagggcatgggagattttggccaatatcgtgcaaagctg
ctggaattggttcgacttattgcttctttcaaacctcttataaccattaccaaagtttca
gacagaatcattatgatcattaagagccttcttctttccccactgccttctcagaattta
actatactagaaagcatgcaacttgctgtggagaatgttttgggagctgtttttgatggt
caaaatgatgagaatgggagtgcttctgatgctcaacttgcttcttgcagaattctagaa
ggtctacttcaacaacttctttctttgaaatggagtgaacctgaattagttgaagttctt
gggcactatttagaagcactgggacccttcttgaagtattatccggatgctgttgaaagt
gttatcaagaaactctttgagctcctaacctcattgccaatagctgtcaaggatcctgca
actagtagatctagacatgcaagattacatatttgcacagcctttatacgattggccaaa
actgctgacacacgtcttttgcctcacatgaagggcatagcagacatggtgtcatatctg
caaaaagaaggtcaattacttcgtggtgaacacaatctttttggtgaatcatttctcatt
atcgcatctgcagctggacctcaacagcagcaagaagttatgacctggttgcttgagcct
ttaagcagtcaatggacacaaatcgagtggcaaaacatgtatttatccgatccatcaggc
ctggttaaattgtgtggtgaaacacagtttatgtggtcattatttcacactgtaactttc
tttgaaaaagcacttaaaagaagtggggttaaaaaaggaaatctgaatgttaataattct
actccttctcatcctttggcttctcatctcccatggatgctcccacctcttctcaaactt
cttcgtgctatgcattctctttggtcgccatctgtcactcaattgttacctggagaaata
aagtctgctatgatcatgactgatgccgaacgaacaagtcttcttggtgaaagtacgaaa
atgcccaagggtacaataactttcactgatggcttgcaaaacacaaaagacggaaatcca
gaaccaaacgaaaccgatatccgaaactggttaaagggtatccgagatagcgggtataat
gtactgggtctatcaacaacagttggagactcgtttttcagatgcatggatattgaagcg
attgacttagcactggttgagaatattcagtcaatggagttcagacatataagacaactt
gttcattcgattttgatcccattagtgaaaaactgtccttctgatctgtgggacatatgg
ttaaaaagactaatgtaccctcttcttgtatattctcatcaagctcttagaatctcatgg
tctggtctcttggatgaagggcgagcaaaagttccagattttaatggagttttaggtgga
tctgatttgaaagttgaagtaatggaagaaaagttactccgtggcttaacccgtgagatt
tcaactctcctttcagttttggggggcccagggttgaaccctgggctcaattctgaacag
tcttctaaagattctaatgtcgtgtcaacctctttagttgggtttcttttgaagaacaag
gatatagctgttccgatgttgagtttgtgtttagatgcttttagatggacggatggtgag
tcgactattaaggttgcatccttctgtggggctgtggtcaacctagctatgttgaccgat
aatgttgagcttcgacaatttgtttgtaaagatcttttttcggggataattcaaggttta
gcactcgagtcaaatgcttttactagtgctgaccttgttagtctgtgtcgagaaatattt
gtaaacttttgcaaggacgaccctacacccagacaaattttgctgtcacttccttgcatt
acgcctcaagatctgttggcatttgaagaagcattggggaagacgagtagtcttaaggaa
caaaagcagcttatgagaagcttgctgttggtaggtactgggaaccagttgaaagcactt
gctgttcaaaaaagtgtgaacgtaatcactaatgttgtagcaagaccacgaagctcaata
tctgcctcagattccagaactgaagatggaggtgcaatcggtttggctgctattatgtag
DBGET
integrated database retrieval system