Lactuca sativa (garden lettuce): 111909688
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Entry
111909688 CDS
T05352
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111909688
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111909688
Enzymes [BR:
lsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
111909688
DNA replication proteins [BR:
lsv03032
]
Prokaryotic type
DNA Topoisomerases
111909688
DNA repair and recombination proteins [BR:
lsv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
111909688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
GTP1_OBG
Motif
Other DBs
NCBI-GeneID:
111909688
NCBI-ProteinID:
XP_023761235
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Position
2:149281443..149287752
Genome browser
AA seq
949 aa
AA seq
DB search
MKPSYSLSNNPSMAFTNSFRFFRCYNQLALPISTARLSRQGCSFDTLRFLSTPRRSSRLT
SVSSKRRENSATEGVEDGGEGGNGGLVTVAAGSDGESRHGRIVPTELHKEATEAYMSYAM
SVLLGRALPDVRDGLKPVHRRILYALHELGLASRKPHKKCARVVGEVLGKFHPHGDTAVY
DSLVRMAQDFSLRCPLVSGHGNFGSVDGDNAAAMRYTECRLEALAETMLLSDLDQDTVDF
VPNFDSSLKEPSLLPARIPNLLLNGSSGIAVGMATNIPPHNLGELVDALIVLIHNPDATL
QELLEYMPGPDFPTGGIIMGNLGILEAYRTGKGRVIVRGKTEIEVSDSRTKSVAIIVKEI
PYQTNKSSLVMKIAELIQNKTLEGISDIRDESDRSGMRIVIELKRGADPAIILNNLYRST
ALQSSFSCNMVGILDGQPKQMGLIELLKAFLDFRCSVVERRARFKLAQARDRNHIVEGIL
IGLDNIDNVIDVIRKATSNSVASADLRKKFQLSEKQAEAILDINLRRLTLLERGKYVNEG
KSLTDQISNLEELLSSKKQILQVIEQEAIEIKNKFSTPRRSALEDADNGTLDDLDVIPNE
EMLLALSEKGYVKRMKPDTFNQQKRGTIGKSVGKLRVNDTMSDFLVCRTHDRLLFFSDKG
IVYSAAAYKIPECSRAAAGTPLIQILSLSDGERITSIIPVSDFAEDQYLLMLTANGYVKK
VSLMYFSSIRSSGIIALQLVPGDELKWVRHCTNEDYIAMASQNGMVILSSCDIIRALTRH
SRGQIAMRLKEGDRMACVDIIPATKQDGIESESESSTPDTPNRAHGPWLLFVSENGYGKR
VPLSHFRKSPLNRIGLKGYKFSSEDKLAAVFVVGFTTADDGESDEEVVLVSQSGTVNRIK
VRDISIQSRYARGVILMRLEHAGKIQSASLISAAETDVEEEVEVEAAVA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccttcatactccctatccaacaatccttcgatggcattcacaaacagctttcga
ttttttcgatgttacaatcagttggctttaccaatttccactgcccgattatcgaggcag
ggatgcagctttgatactctgcggttcctctcgacccctcgacgttctagccgtctgacc
tcggtgagttcgaagcggcgagaaaattccgcgacagagggcgtcgaggacgggggagag
ggcggaaatgggggtttagtgacggtagctgcaggtagcgatggcgaatcgaggcatggg
aggattgtccctacggagcttcataaagaggctacggaagcatatatgtcctatgctatg
tccgttctgcttggacgagcattgcctgatgttcgtgatggattgaagcccgttcaccgc
cgtatattatatgcattgcatgaattgggccttgcatcacgtaaacctcataagaaatgt
gccagagttgttggagaggtccttggtaagtttcacccacatggtgatactgccgtctat
gattcactggtccgaatggcacaggatttttcactgcgttgtccactcgtgagtggtcat
gggaattttggctcagtggatggagataatgctgcagcaatgcggtatacagaatgcaga
ttggaagcacttgctgaaacaatgcttctatcagatttggatcaggatacagttgatttt
gttccaaactttgacagttctctaaaagaaccatcattgcttcctgctaggatcccaaac
ttgttattgaatgggtcttcagggattgcggtgggaatggcaaccaatatccctccacat
aatcttggggagttagttgatgctctaattgtgttgattcacaatccagatgccactctg
caagaattgcttgagtacatgcctggacctgacttcccaacaggaggaatcataatggga
aatcttggaatcttggaggcttatagaactggtaaagggcgtgtcattgtcagaggaaaa
acagagatagaagtatcagattctagaacaaagagcgttgcaattatagtaaaagagatt
ccttatcagaccaacaaatcctctctagtcatgaaaattgctgagcttattcagaacaag
actttggaaggcataagtgatatccgtgatgagagtgatcgatctggaatgcgaatagtc
attgagcttaagaggggtgctgatccagcaattattctgaataatctataccgttccact
gctctacagtcaagttttagctgcaacatggttggtattctcgatggacaacctaaacaa
atgggcttaatagaattgcttaaggctttcttggattttagatgctcagtggttgaaaga
cgtgcaaggtttaagcttgcacaagctagagacagaaatcatattgttgagggtatctta
attgggctagataatatcgataatgtaattgatgtaatcagaaaagctacaagtaactca
gttgcatcagctgatctgaggaaaaagtttcaattatccgaaaaacaagctgaagcaata
ttagatatcaatttacgaagacttacattacttgagagaggcaagtatgttaatgaaggg
aaatccttaactgaccaaatttctaacttggaggaacttctatctagcaaaaagcaaata
ttacaggtgattgaacaagaagcaattgagataaagaacaaattctcaactccacgtcgt
tccgctttggaagatgctgataatggcacacttgatgatttagatgttatcccaaatgaa
gaaatgttattggcacttagtgaaaagggctatgtgaaaagaatgaaaccagacactttt
aatcaacaaaaacgtggcaccattggtaaatcagttgggaaactaagagtcaatgacaca
atgtcagactttcttgtatgtcgtacccatgatcgactcctgtttttcagtgataagggt
attgtgtattctgctgcggcctacaagattccggaatgttctcgggcagctgcaggcaca
cccttgatccagattttgtccttatctgatggtgaacgaattacgtctatcatccctgtt
agtgattttgctgaagatcaatatcttttaatgctaaccgcaaatggatatgttaaaaaa
gtatctttgatgtacttctcctccattaggtcatctggtatcatagcacttcaactggtg
cctggtgatgaactgaaatgggtccgtcattgcacaaacgaagactatattgcaatggct
tcacaaaacggaatggttattcttagttcttgtgatattatccgagcacttactagacat
agccgaggtcagattgcaatgagactgaaagaaggtgatagaatggcatgtgtggatatt
attcctgcaaccaaacaggatggaatagaaagtgaatctgaatctagcactcccgacacc
cctaaccgagcacatgggccatggctgttgtttgtgtctgaaaatggttatggaaaacga
gttcctctcagccactttcgcaaatcacctttgaataggattggattaaaagggtacaag
ttttcatcggaagacaaattggcagctgtttttgtagttggttttactacagcagatgat
ggtgaaagtgatgaagaagttgttcttgtgagtcagagtggtacagtcaaccggataaaa
gtcagggatatttctattcagtcacgctacgcaaggggagtgatattgatgaggcttgag
catgctgggaagatccaatcagcttcattgatatcggctgcagaaacagatgtggaggag
gaagttgaagttgaagctgctgtggcataa
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