Lactuca sativa (garden lettuce): 111909692
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Entry
111909692 CDS
T05352
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111909692
03036 Chromosome and associated proteins [BR:
lsv03036
]
111909692
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111909692
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111909692
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111909692
microRNA pathway
RISC loading complex
111909692
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
111909692
NCBI-ProteinID:
XP_023761239
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Position
2:148932472..148937418
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AA seq
880 aa
AA seq
DB search
MKHSKPEALPPPPPVIPSNFAPAKFDQSNRRPMARSELGTKGQRISLLTNHFNVKLSRTN
DHFYQYNVAFFNEDGNPVESKGIGRRLLDMVHKTYESEMGGKEVAFDGEKTLFTVGALPG
TKLEFIVVLENASSNRTIRGETKRSRRLPQSKPYKVTLSYATKIPIQAIVNALKGQDSEQ
FNDAMRVFDVLLRQHAAKQGCLLVRQCYFKNDPRNFIDIGGGVMGCKGFHSSFHATQSGF
SLNIDVSTTMIVKPGKVVDFLLENQNVCCIKEIDWLKARRTLKNLRIKTFPSNLHYKIIG
LSEKTCREQTFSLKKNNHRDEAIDITVYQYFVEYHHKHLEYSADYPCLVVGKLKSPTYIP
LELCELISLQCYTKPLSNSQRASLVKSRQKPQDQMRALMGELKQSNYDADPLINATGITI
SNTFTKLEGRVLDPPKLKLGSGRYLVPSGGRWSFNNKTFVEPTRITHWAIVNFSSCCDMN
TLRRDLPRCSQAKGLDLDPPSAVIHENSQFRCSPAHVRVDKMFEAIRQKLSSPPTFILCI
LPERKNSDIYGPWKRKCLVDLGIVTQCIAPIKIDHQYVTNMLMKINAKMGGINSLLSMEF
ANAIPLVSRTPTIIFGMDVSHGSPGRADVPSIAAVVSSRKWPQISRYRASFRAQAARLEM
IDGLFEPVLEEKDEGMIRELLDDFYLSTPKLKPKNIIIFRDGVSESQFNQVLNIELNQII
EACKFLDEQWDPKFLVIVAQKRHHTKFFQANSEANVPPGTIVDNKVCHPKNNDFYLCAQN
GKIGTTRPTHYHVLLDQIKFSADELQELVHSLSYVYQRSTTAISAVAPIRYAHLAAGQVA
QFVKFDDMSDTASSHSGGDAGGFTQLPKLHHKVSSSMFFC
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaagcactcgaaaccagaagcattgccaccacctccgcctgtgattccatccaatttt
gctccggcaaaattcgatcagtcaaaccgccgtccgatggctaggagtgaacttggcact
aaaggccaaaggatctctctgttgaccaaccatttcaatgtgaaattaagcaggactaat
gaccatttctatcaatacaatgttgcgtttttcaatgaagatggaaatcctgttgaatca
aaaggtataggtagaagattactagatatggtccataaaacttatgagtctgaaatgggt
ggtaaagaggtcgcgtttgatggtgaaaagacactttttacagtcggtgctttaccaggg
actaaactcgagttcatagttgtgttggagaacgcctcttcaaatagaactatacgaggt
gaaaccaagagatcaaggcgtctgcctcaatccaaaccatataaggtaacactaagttat
gccacgaagatcccgattcaagccattgttaatgcacttaaaggtcaagattctgagcaa
ttcaatgatgctatgagggttttcgatgttcttttgagacaacatgctgcaaaacaaggt
tgtcttcttgttagacaatgctattttaagaacgacccaagaaacttcatagacattgga
ggtggtgttatgggttgcaagggttttcattccagttttcatgccacacaatctggtttt
agtttgaacattgatgtgtcgactacaatgatagtcaaaccagggaaagttgtggacttt
cttcttgaaaaccaaaatgtttgttgcatcaaggagatcgattggcttaaggcaagaaga
acgttgaagaaccttcgtatcaagaccttcccctctaatctccattataagattattggg
ttgagcgaaaaaacatgcagagaacagacgttttcattgaaaaagaataatcacagagat
gaggccattgatataacagtgtatcaatactttgttgagtatcaccataaacatctcgaa
tactctgcagattatccatgtcttgtcgttggaaaactaaagagcccaacgtatatccca
ttagagttgtgcgaattgatatctctacaatgctacaccaaacccttatcaaattcacaa
agagcttcactagttaaatcaagacaaaagcctcaagatcaaatgcgagccttgatgggt
gaactaaagcaaagtaactatgatgccgatcctcttattaatgccactgggattacaatc
agcaatactttcactaaacttgagggtcgtgttctcgatcctccaaagttaaaacttggg
agtggaagatacttggttcctagtggtggtagatggagtttcaacaacaagacatttgtt
gagccaacaaggatcacacattgggcgattgtcaacttttcttcatgttgtgacatgaat
acccttcgtagagatcttccgaggtgttcccaagccaaaggacttgatcttgatccacca
tctgctgtaatccatgagaattctcaatttaggtgtagtccggctcatgttcgtgtagac
aagatgtttgaagctataagacaaaaactttccagcccccctacgtttattctatgtatc
ctccctgaacgaaaaaattcagacatctatggtccatggaagcgaaaatgccttgtggac
cttgggatcgtcacacagtgcattgccccgattaagatcgaccaccagtatgtcacaaac
atgcttatgaagatcaacgctaagatgggtggaataaactctttgttgtcaatggagttt
gcaaatgctataccattggtgtcacggactcccactataatctttgggatggatgtctct
catgggtcacctggacgtgcagatgttccttcaattgctgctgttgtaagctcgaggaaa
tggccacaaatttcgcgatacagggcgtcttttcgtgcacaggctgcaagattagagatg
atcgatggcttgtttgagcctgttttagaggaaaaagatgaaggaatgataagggagctg
ttggatgacttctatttaagcactccaaaattgaaaccgaagaacataattatattcaga
gatggtgtaagcgaatcgcagtttaatcaggtactcaacatcgagcttaatcaaatcatt
gaagcgtgtaagttcttggatgaacaatgggatccgaagtttctagtgattgtagcacaa
aagaggcatcacaccaagttcttccaagccaattcagaagccaatgtcccaccagggaca
atcgttgataataaagtttgtcatccaaagaacaacgacttctatttatgcgctcaaaat
ggaaaaattgggactacacgacccacacattaccatgtgcttctagatcagattaagttt
tctgctgatgagttacaagagcttgttcattcgctatcatatgtttaccaaaggagcaca
actgctatctctgcagttgctccgatccgctatgcccacttggcagcaggacaggtggca
cagtttgtgaagtttgatgacatgtcagacactgcgtctagtcacagtggtggtgatgca
ggtggtttcacccagttacctaagcttcaccataaggtatccagttcgatgttcttctgc
tga
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