Lactuca sativa (garden lettuce): 111909693
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Entry
111909693 CDS
T05352
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111909693
03036 Chromosome and associated proteins [BR:
lsv03036
]
111909693
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111909693
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111909693
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111909693
microRNA pathway
RISC loading complex
111909693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF493
Motif
Other DBs
NCBI-GeneID:
111909693
NCBI-ProteinID:
XP_023761240
LinkDB
All DBs
Position
2:complement(148851401..148855973)
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AA seq
900 aa
AA seq
DB search
MKHELPPPPPIPPNFVPAKVNESNRRPMARRELGTKGQRIPLLTNHFNVKLSRTNDHFYQ
YSVALFYEDGNPVEAKGIGRKILDMVHKTYESEMGGKGFAYDGEKTLFTVGSLPRTKLEF
NVVLENAVSNRTIRGGSPSDGETKRSRRVPQSKQFKVTISYATKIPIQAIVNALQGHDSE
QFHEAVRVLDVLLRQHAAKQGCLLVKQCYFQNDSRNFIGIGGGVVGCRGFHSSFRATQSG
LSLNMDVSTTMIVKPGKVVDFLCENQNVRNIREIDWVKAKRMLKNLRVKTFPSNREYKII
GLSEKTCREQMFSMKQKNQRDGNSPSETIDITVLQYYADHHGRRLEYSADYPCLDVGKTK
RPVYIPLELCDLISLQRYTKALSNLQKASLVEKSRQKPRDRMQALTGALNQSNYGADPLI
NATGITISTTFTQVEGRVLEPPKLKFGRGGDMVPRGGRWNFNNKTLIEPKRITNWVVVNF
SARCDMDALKNNLRICSQAKGIELDPPHGVLDENPQFRRSPAPVRVDKMFEAIKERLRGP
PSFILCILPERKNSDIYGPWKRKCLVDHGIVTQCIAPTRINDQYVTNVLLKVNAKMGGIN
SLLSMEFANAIPLVSRTPTMIFGMDVSHGSPGRADVPSIAAVVSSRKWPQISQYRASVRA
QSARVEMIDALFKPVSKVDNEGRTKLEDEGMIRELLVDFYLSTPQLKPQNIIIFRDGVSE
SQFNQVLNIELNQIIEACKFMDEQWDPKFLFIVAQKTHHTKFFQANSEANVPPGTVVDNK
VCHPKSNDFYLCAQNGPIGTTRPTHYHVLLDEIGFSADELQELVHSLSYVYQRSTTAISV
VAPICYAHLAAGQVAQFVKFDDMSDTTSSHSGGGSGGSGAGGFTQLPKLHKNVWSSMFFC
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacgaattaccaccgcctccgcctattccaccaaattttgttccggcgaaagtc
aacgagtcaaaccgccgtccaatggccaggcgtgaattgggcactaaaggtcaaaggatc
cctctgttgaccaaccatttcaacgtgaaactaagcaggactaacgaccacttttatcaa
tatagtgttgcgttattttatgaagatggaaatccagtcgaggcaaaagggatcggaaga
aaaatactcgatatggttcataaaacctacgaatctgaaatgggcgggaaaggatttgcg
tatgatggtgaaaagactctttttaccgttggttctttacctagaactaagctcgagttc
aatgttgttttggagaatgctgtatcaaatagaactatccgaggtggaagcccaagtgat
ggagaaacaaagagatcgaggcgtgtgcctcagtcaaagcaatttaaggtgactataagt
tatgctacaaagatcccaattcaagccattgttaatgcgcttcaaggtcatgattcagag
caattccatgaagctgttagggttttagatgttcttcttagacaacacgctgcgaaacaa
ggttgtcttctggttaaacagtgttacttccagaatgactcacgaaactttataggaatt
ggaggtggtgttgtggggtgtaggggttttcattctagttttcgtgccactcaatctggt
ttgagtttgaacatggatgtatcgactacaatgattgtgaagccagggaaagttgtggac
tttctttgtgagaaccaaaatgttcgtaacattagggagattgattgggtgaaggcaaaa
agaatgctcaagaatttgcgtgtcaagaccttcccctctaatcgtgagtacaaaattatt
gggttgagcgagaaaacatgtagagaacaaatgttttcaatgaaacaaaagaatcaaaga
gatggaaatagcccaagtgagacaattgacataacagtgttacaatactatgctgatcat
cacggaagacgccttgaatactctgctgattatccatgtcttgatgttggcaaaactaag
aggccagtttatatcccacttgagctgtgtgatttgatttcccttcaacgatacaccaag
gctttgtctaatttacaaaaagcttcacttgttgagaagtcacgacaaaagcctcgtgat
cgaatgcaagcattgactggtgcattgaatcaaagtaactatggtgctgatcctctcatt
aatgccactgggattacaatcagtaccactttcactcaagttgagggtcgggttttggaa
cctccaaagttgaaattcgggagaggtggggacatggtgccacgtggcggtcgatggaac
ttcaacaacaagacacttattgagccaaaaaggatcaccaattgggttgtagtcaacttt
tctgcacgatgtgacatggatgcccttaagaacaacctccgcatttgttctcaagcaaaa
ggaattgaacttgatccaccacatggtgtactcgatgagaaccctcaattcaggcgtagt
cctgctcctgttcgtgttgacaaaatgtttgaagcgataaaagagagacttcggggccca
ccttcttttattctatgcatcctccctgaacgaaagaattcagatatctatggtccatgg
aagcgaaaatgccttgttgaccatgggattgtcacacaatgcattgccccaactaggatc
aacgaccagtatgtcacaaacgtgcttctcaaggtcaacgcaaagatgggtggaataaac
tctttgttgtcaatggagtttgcaaatgctataccattggtatcaaggactcccaccatg
atctttgggatggatgtctctcatgggtcacctggacgtgcggatgttccttcaattgct
gctgttgtaagctcaaggaaatggcctcaaatttcgcaatacagagcatctgttcgtgca
caatcagcaagagttgagatgattgatgccttgtttaagcctgtttcaaaggttgacaat
gaaggaaggacgaagcttgaagatgaaggaatgataagggagctcttggttgacttctat
ttaagcactcctcagctgaaaccccagaatataattatattcagggatggtgtaagtgaa
tcccaatttaatcaagtgcttaacatcgagcttaatcaaatcattgaggcgtgtaagttc
atggatgaacaatgggatccaaagtttttgtttatcgtggcacaaaagactcatcacaca
aaattcttccaagccaattcagaagctaacgttcctccaggaacagttgttgataataaa
gtttgtcatcctaagagcaacgacttctacttatgcgcacaaaatggaccaattggaact
acacgacctactcattaccatgttcttcttgatgagattgggttttctgctgatgagttg
caagagcttgttcattcgttatcctatgtgtaccaaaggagtacaactgctatatctgta
gttgctccgatctgctatgctcatttggcggcaggacaggtggcgcaatttgttaagttt
gatgacatgtcggacaccacatctagtcatagtggtggtggtagtggtggtagtggtgca
ggtgggttcacacaattgcccaagcttcataaaaatgtatggagttctatgttcttctgc
tga
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