Lactuca sativa (garden lettuce): 111909701
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Entry
111909701 CDS
T05352
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111909701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111909701
03110 Chaperones and folding catalysts [BR:
lsv03110
]
111909701
03029 Mitochondrial biogenesis [BR:
lsv03029
]
111909701
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111909701
Enzymes [BR:
lsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
111909701
Messenger RNA biogenesis [BR:
lsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
111909701
Chaperones and folding catalysts [BR:
lsv03110
]
Heat shock proteins
HSP60 / Chaperonin
111909701
Mitochondrial biogenesis [BR:
lsv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
111909701
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111909701
Exosomal proteins of other body fluids (saliva and urine)
111909701
Exosomal proteins of breast cancer cells
111909701
Exosomal proteins of colorectal cancer cells
111909701
Exosomal proteins of bladder cancer cells
111909701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TAL_FSA
Motif
Other DBs
NCBI-GeneID:
111909701
NCBI-ProteinID:
XP_023761252
LinkDB
All DBs
Position
2:148546607..148550487
Genome browser
AA seq
589 aa
AA seq
DB search
MSSSLLSPPPLFTHPVSCSLHQGSGKQSFCGVLWRRKQVLTKRMVVVKAGAKRVSFDKKC
REGLVAGIDKLADAVSVTLGPKGRNVVLSESGTLKVINDGVTIAKAIELPDSIENAGAVL
IQEVATKTNDLAGDGTTTAIVLAREMIKSGLLAVAFGANPISLKKGMEKTVKELIKVLKK
KSIPVSKRDDIKAIASISAGNDEFIGNLIAEAIDKIGHDGIISIESSSSSETSVIVEEGM
KIDKGYMSPHFVTNQNNLSVEFENAKVLITDQKISSVKEIVPLLEKCTQLSVPLLIFAED
ISISVLETLIVNKNQGLLRVAVVKCPGVGERKKALLQDIALMTGADFLSGDLGLSLEYAT
SDQLGIAQKVTITSNYTTIVADSSMKAEIKARISQIKKDLSETDSSYLSKKLSERIAKLS
GGVAIIKVGAHTEMELEDRKLRIEDAKNATYAAMDEGIVPGGGATYIHLLEEIPSIKKLM
EDPDEESGVNIIASALQAPSKLIAANAGVDGDVVVEKMKKLEWEFGYNAMTDTYEDLVVA
GVIDPCRVSRCALQNAVSIAAIILTTQAILVEKIKEKKPPVPLLPGIHP
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatctctcttatctcctcctccgctgttcacccatccggtatcttgttcgctc
catcaagggtctggaaaacaaagcttttgtggagtattatggagaaggaagcaggtttta
acaaagagaatggtagtggttaaagcaggagcaaaacgagtttctttcgataaaaaatgc
agagaaggtttagttgctggtatagataaactcgctgatgctgtttctgtcactttagga
ccaaaaggccgaaatgttgttctttctgaatctggaacactcaaagttatcaacgatggt
gtcaccattgctaaagccatagagcttcctgattcaattgaaaacgcaggagcagtgctt
atccaagaggttgcaactaaaacaaatgatttagctggtgatggaaccaccactgcaatt
gttcttgcaagagaaatgatcaaatctggattattggctgtagcttttggagcaaatccc
atttctttaaagaaaggaatggagaagactgtaaaagaattgatcaaagttttgaaaaag
aaatcgattccagtcagcaaaagagatgatatcaaagccatagcttccatctctgctgga
aatgatgaatttattggaaacttaattgctgaagccattgataaaatcggtcatgatgga
ataatctccattgaatcttcttcatcaagtgaaacttcagtgattgttgaagaaggaatg
aagatcgacaaaggatacatgtctcctcattttgtcacaaatcagaacaatttatctgtg
gaatttgaaaatgctaaagtcctgataacagatcaaaagatatcatctgtgaaagaaatt
gtcccattgctagaaaagtgtactcaattaagtgtccctttgctcatttttgctgaagat
atctcaatctcagttcttgaaaccctaattgttaacaaaaatcaaggtttacttagggtt
gctgttgtgaaatgtcctggtgttggggaacgaaagaaagctttacttcaagatattgcc
ctcatgacaggagctgattttttatctggagatttgggtttatctctagaatatgcaacc
tctgatcagcttggaattgcacaaaaagtaactataacaagtaattacacaactattgta
gctgattcatccatgaaagctgaaatcaaagcaagaatttcacaaataaagaaagatctt
tcagaaacagatagttcttatctctctaaaaagctcagtgaacgaattgcaaaactctct
ggtggtgttgccattatcaaggtaggggcccacactgagatggaattagaagatcgaaag
ctaagaattgaggatgcaaaaaatgccacgtatgcagccatggatgagggtattgtgcca
ggtggtggggccacatatattcatcttctggaggaaattccctccattaaaaagttaatg
gaagatccagatgaagaaagtggtgtcaacatcatagcatccgcgttgcaagctccttca
aaactgatagcagcaaatgcaggggtggatggtgatgtggtggttgagaagatgaagaaa
cttgaatgggaatttgggtataatgcaatgacagatacatatgaagatcttgttgtagca
ggagtcattgacccttgtagggtttcaaggtgtgcccttcaaaatgcagtttcaattgct
gctatcattctcactacccaagccattttagttgagaaaataaaagagaaaaaaccaccc
gtacctcttcttcctggaatacatccttga
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