Lactuca sativa (garden lettuce): 111909904
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Entry
111909904 CDS
T05352
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111909904
Transcription machinery [BR:
lsv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111909904
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
HTH_11
Motif
Other DBs
NCBI-GeneID:
111909904
NCBI-ProteinID:
XP_023761456
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Position
4:360326558..360330231
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AA seq
515 aa
AA seq
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MGVVTVSSSAARTPLGLSARFSSHQSPFKRKSILAFKTDKPKNTTLVSSKESANLSVDKS
KENPKRLRRSKKPSERVQALSTVEAPSCSLDLDYNEAAAELDRLYKLSPSPTTIDSDTND
HVKKTPRRKKKNFDTNEKLKNTTVDIVRGHHKKLQRLTLEKRIHLKSEKNSTLITSNLKR
KQGKVNEDEKINRLVKDYTASTDLGSLDWKKMKIPPVLPSSEHTRLFKLLQTMKAIIGVR
EELEKTLEREPTDGELAEATNMNVSQLRKQIGIGQAARNKLIKHNLRLVLFVMNKYFQEF
ANGRNFQDFCQAGVKGLITAVDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFKVPFGL
ESVRIEIQKAKKKLWFELMRTPTDEEIAKKAGISLQRYREVTKVSKPILSLNRRNSVTQE
EFINTIEDNDGVGDDERRQTALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIA
GNLNISREMVRKHEVKALMKLKHPARVEYLRHYLL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtatctagctctgctgcaaggaccccacttggattaagtgcaaga
ttctcttctcatcaatctccattcaaaagaaagtcaatattagcattcaaaacagataaa
cccaagaacacaactttagtttcttccaaagaatctgcaaatttatctgtcgacaaatct
aaagaaaacccaaagagacttagacgaagtaaaaagccttcagaaagagtacaagctttg
tccactgttgaagctccttcatgctcattagatttggattacaatgaagctgcagctgaa
ctcgatagattatacaaactgagtccaagtccaacaaccattgactctgataccaatgat
catgtgaaaaaaactccacgaagaaaaaagaaaaactttgataccaatgagaagctaaaa
aacacaaccgttgatattgtaagggggcaccataaaaagttgcaaaggttgactcttgag
aaaaggattcatctgaaaagtgagaaaaactcaacattaattacatcaaatttgaaaaga
aaacaaggaaaggtgaatgaagatgaaaagatcaacagactggttaaagactacacagcc
tctacagatttaggaagtttagattggaagaaaatgaaaatcccaccggttcttccttct
tcagaacacactcgactctttaagttattacaaacaatgaaggcaatcattggagtgaga
gaagagttggagaaaactttggaaagagaaccaacagatggagagttagcagaggctaca
aacatgaacgtgtcacaactaagaaaacaaattggaatcggtcaagcagctagaaataaa
ctaataaagcataatcttcgactggttttgtttgtgatgaacaaatattttcaagagttt
gcaaatggaagaaatttccaagacttttgccaagcaggagtaaagggtttgatcacagcc
gttgatcgctttgaacctggaagaaaactacaactttcaacatatgctttgttttggatt
cgacatgctatcatacgttctatgacactttcaagtttctttaaagtaccttttggcctt
gaatcggttagaatagagatacaaaaggcaaaaaagaagctatggtttgaacttatgaga
actccaacagacgaagagatagcaaagaaagctggaatttcacttcagagataccgtgaa
gtgacaaaagtatcaaaacccattctctctctaaacagaagaaattcagttacacaagaa
gaatttattaacacgattgaggataatgatggtgttggtgatgatgagaggcgccaaact
gctcttctcaggcttgccctcgatgatgtgcttgattcattgaagccgaaggagagcttg
gtgataagacaaagatatggattggatggaaaagggaatagaacactgggagagattgcg
ggtaatttgaatatatcaagagaaatggttaggaagcatgaagtgaaggctctgatgaag
ctcaaacatccagctcgagttgaatatctacgccactatctcttatga
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