Lactuca sativa (garden lettuce): 111909907
Help
Entry
111909907 CDS
T05352
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111909907
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111909907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Gifsy-2
Motif
Other DBs
NCBI-GeneID:
111909907
NCBI-ProteinID:
XP_023761458
LinkDB
All DBs
Position
2:complement(186749731..186751461)
Genome browser
AA seq
405 aa
AA seq
DB search
MATTFLPLILLLSSLSLLTIASSSSSQKNPESVVEEVNRSINGSRRNLGYLSCGNGNPID
DCWRCDPNWATNRQRLADCAIGFGKDAIGGKNGRIYVVTDPRNDNPVNPVPGTLRYGVIQ
DEPLWIIFQREMVIQLRQELVMNSFKTIDGRGTNVHIGNGPCITIHDATNIIIHGIHIHD
CEQAGNGNIRNSPHHSGWWTQSDGDGITIESSKHIWIDHCSLSNCHDGLIDVIHGSTAIT
ISNNYMTHHDKVMLLGHSDSYTQDKQMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSASPTIYSQGNRFTAPNIRFRKQVTKHENAKESEWKNWNWRSEGDLMLNGA
YFLESGKGAASSYARASSLSGRPSSLVGAMTRTAGALACWKGSQC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacatttctgccattgatccttttgctttcctcattgtctctactaacaatc
gcttcttcttcctcatcccaaaaaaaccctgaatcagtcgtggaagaagtcaaccggagc
atcaatggctcccggagaaacttgggttacctctcctgcggcaacggcaacccaattgac
gactgctggaggtgtgacccgaactgggccaccaatcgtcaaaggctagctgactgcgca
attggatttggaaaggacgccatcggcgggaaaaacggacggatatacgtcgtcaccgat
ccccggaatgataatccggtgaacccggttccgggaacactcagatatggcgtgattcaa
gatgaaccgttgtggatcatctttcaacgtgaaatggtgatccaattacgtcaagagctt
gtgatgaactcgttcaaaaccattgacggaaggggtaccaatgttcatattggtaatggt
ccatgcatcaccatacatgatgctactaacatcatcatccatgggattcatatacatgac
tgtgagcaggccggaaatggcaacatcagaaactcaccacatcattccggatggtggact
cagtccgatggtgatgggattaccatagagtcaagcaagcatatatggatagatcactgt
tcattgtctaattgtcatgatggactcattgatgtcatccatggatccacagccatcacc
atatctaacaattacatgactcatcatgataaagtcatgttgttgggacacagtgatagt
tatacgcaggataaacagatgcaagttaccattgcgtttaatcattttggtgaaggtctt
gttcagagaatgcctagatgtagacatgggtatttccatgtagtgaataatgactacacc
cattgggaaatgtatgcaatcggaggcagtgcttcccctaccatctatagccaaggcaat
agatttactgcacccaatatcagatttagaaaacaagtgacaaagcatgagaatgcaaag
gaaagcgaatggaagaattggaattggagatcggaaggggatttgatgctgaatggagca
tatttcttggagtcgggaaaaggtgcggcttcatcatatgcaagagcttcaagcttaagt
ggcagaccatcttcacttgtgggggcgatgactaggactgccggagcacttgcttgctgg
aaaggctctcaatgctga
DBGET
integrated database retrieval system