Lactuca sativa (garden lettuce): 111909925
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Entry
111909925 CDS
T05352
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00531
Glycosaminoglycan degradation
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
111909925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lsv00536
]
111909925
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
111909925
Glycosaminoglycan binding proteins [BR:
lsv00536
]
Heparan sulfate / Heparin
Enzymes
111909925
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
111909925
NCBI-ProteinID:
XP_042756766
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All DBs
Position
1:complement(52789634..52792931)
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AA seq
549 aa
AA seq
DB search
MSVLLILHMLLLLLTVVCFSSKMVVSLSSSVETSSVVEGSVNINGMTSIGFIDEDFICAT
LDWWPQEKCDYGSCSWGNASLLNLDLNNQILFNAIKAFSPLKVRLGGTLQDKVMYQRTGD
QGPCDNFTKNTSLMFGFTNGCLTMSRWDQLNIFFKNSGAKVVFGLNALTGRQIGYDGTTF
GSWDLSNAEALIRYTVNNGYVIYGWELGNELSGRGIGTSVAAKQYASDTISLQNLVQKIY
NGSQEKPIVLGPGGFFDANWFNVYVTEASGSLQVITQHIYNLGPGVDAHLVEKILNPSYL
DGGSQPFRDLQNILKKSRTSTVAWVGEAGGAYNSGRNLVTNAFVFGFWYLDQLGMASTYN
TTTYCRQTLIGGNYGLLNTTTFVPNPDYYGALLWHRLMGRHVLSTNFSGTNKIRSYAHCS
KTSTGITLLLINLDGIKTTNVGISFINTIKIITQTTKKEPKEQKRTKFSKMRRNPKVNEV
IREEYHLTAKNGDLHSQIVLLNGKELIVNSSGIIPSLNPIKQNFSSPINVAPYSIVFVHI
PSVRFPACI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtattgcttattttacatatgttgttacttttgttaaccgtggtttgttttagc
tctaaaatggttgtttcactttcatcaagtgttgagacttcaagtgttgtcgaggggagt
gtaaacataaacgggatgacttccatcggtttcattgatgaagacttcatatgtgcaact
ttagattggtggccacaagaaaaatgtgattatggaagttgtagctggggaaatgcttct
cttctcaatctggacctaaacaaccaaatcttgtttaatgcaatcaaagccttttctcct
ttgaaagttagattgggtgggactttgcaagacaaggtgatgtaccaaaggactggagat
cagggaccatgtgacaacttcaccaaaaacactagtctgatgtttggcttcaccaatggt
tgcttgaccatgtcaagatgggatcaactcaacattttctttaaaaattctggggcaaag
gttgtgttcggtttaaatgctctaacaggccgacaaatcggctatgatggtacgacgttt
ggatcatgggacttgagcaatgcagaagctcttataagatacactgtgaataatggctat
gttatttatggttgggaacttggaaatgaactgagtggaagggggattggaacaagtgtt
gcagcaaaacaatatgcatcggatacaatttcccttcaaaatttagtgcaaaagatatac
aatggatctcaagaaaaaccgatagttcttggccccggaggattctttgatgcaaattgg
ttcaatgtgtatgtaacagaagcctcgggttccctccaagtgatcactcaacacatttat
aatcttggtccaggtgtcgacgctcatttggttgaaaagatactcaacccatcgtatctt
gatggaggatcacaaccgtttagagatcttcaaaatattttgaagaaatccaggacttct
acagttgcttgggtaggtgaagccggtggtgcgtataatagtggtcgtaaccttgtcaca
aacgcttttgtatttggcttttggtacttggatcaacttggaatggcttctacatataat
acgacaacatattgtcgacaaacattgataggaggaaactatggacttctcaacactacc
acatttgtcccaaatcctgattactatggtgcgcttctttggcaccggctaatgggaaga
catgttctatcaacaaattttagtggcacaaacaaaatacgttcatacgctcattgctca
aagacttcgacggggatcacgttactattgatcaacctagacggtattaaaacaacaaat
gtcgggatttcttttataaacaccattaaaataatcacacaaacaacaaaaaaagaaccg
aaagaacaaaaaagaacgaagttttctaaaatgagaagaaatcctaaagttaatgaggtt
ataagagaagagtatcatctaacagcaaaaaatggagatttgcatagccaaatagtattg
ctaaatgggaaggaattgattgtaaattcatcagggattataccttcattgaatccgata
aaacaaaacttctcaagtccaattaatgttgctccttactccattgtgtttgttcatata
cctagtgtacgttttcctgcatgtatttga
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