Lactuca sativa (garden lettuce): 111909987
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Entry
111909987 CDS
T05352
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111909987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111909987
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111909987
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111909987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Nop14
Motif
Other DBs
NCBI-GeneID:
111909987
NCBI-ProteinID:
XP_023761554
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All DBs
Position
4:335952523..335954200
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AA seq
429 aa
AA seq
DB search
MRLRVKNQINDGSPASTASTNQTTSRRVESAITMARFSIGEDDDDTSLANKRPRFAEPAS
QSQPRSQRSVPSPPPPPFVADEDEEFGEFIVMEEVDSDSQGSEEEEDDEDDEVEAEAVEE
EDDDEEDEDVGSDEDGFTEVQPLSEGQNGALPVRSSHIGLSNTTASMKSSSTPPPVFNNA
IGALQVVLTDPDVLDCPICLDPLFSPVFQCENGHIACSTCCQKVKRKCPSCCMPIGYNRC
RAIEKVLESVKISCKNTPYGCKESIPYSKKNDHEQTCLHTKCCCPISSCPFIGSSKNLNL
HFGIQHSASTTRFTYNTTFIVNVETNKKHIFLQEQHESVIFIINHEAKQHGRVLNVDCVG
PSLLKTSFLYQLTVKNMETSLSLQSVPEIYAEWCEHGPVKNYLIAPTEFVGYNGVLSLHV
CIKKAVFDL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgcgtgtgaaaaatcagataaacgatggatccccagcatcgacggcctccacg
aatcaaaccacttccaggagagttgaaagtgcgattacgatggcgagattttcaatcggc
gaagacgacgacgatacttcacttgccaataaacggccaagattcgccgaacccgcatct
caatcgcaaccccggtctcagagatctgtcccatcgccaccgccaccgccgtttgtggcg
gatgaagacgaagaatttggggagtttattgtaatggaagaggtagactcggattcgcaa
ggatctgaagaagaggaagacgatgaggacgacgaggtggaagcggaggccgtggaagag
gaggatgacgatgaagaagacgaagacgttggaagcgatgaagatggttttacagaggtg
cagccactatcagaagggcaaaatggggcgttgccggtgcgttcgtcacacatagggtta
tcaaacaccaccgcttcgatgaaaagctctagtactcctccgccggtgtttaacaacgca
attggagcgttacaggtggtgcttactgatccagatgtattggattgcccgatttgcctt
gatccattgttttcccctgtcttccagtgtgagaatggccatatagcatgctctacatgc
tgccaaaaagtgaaaagaaagtgcccttcttgctgcatgccaatcggctacaatcgttgt
agagctatagaaaaagtcttagaatccgttaaaatatcatgcaaaaacactccatatgga
tgcaaagaatcaatcccatatagcaaaaagaatgatcatgaacaaacatgtcttcacacc
aaatgttgttgccctatttcatcatgtccatttattggttcttccaagaatctcaacctc
cattttggcatccaacattcagcctccaccacccgtttcacctacaacaccaccttcatt
gttaatgtagaaactaacaaaaagcacatctttcttcaagaacaacatgaaagtgtcatc
tttataatcaatcatgaagctaaacaacatgggcgtgttttgaatgttgattgtgtgggc
ccgagtttgttaaagactagttttttatatcaattgactgtgaaaaacatggagacatct
ttgtcattgcaatctgttccagagatatatgcagagtggtgtgaacatggacctgtaaag
aattacttaattgcccctacagagtttgtgggttataatggggttctgtctttacatgtt
tgcataaagaaagctgtgtttgatttataa
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