Lactuca sativa (garden lettuce): 111910012
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Entry
111910012 CDS
T05352
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03430
Mismatch repair
lsv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111910012
03460 Fanconi anemia pathway
111910012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111910012
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111910012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
111910012
NCBI-ProteinID:
XP_023761580
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All DBs
Position
1:complement(40056782..40063120)
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AA seq
721 aa
AA seq
DB search
METDAVLPPPSQDPPRIQRLDESVVNRIAAGEVIQRPVAAVKELVENSLDAGSTSIHVVI
KDGGLKLIQVSDDGHGIRYDDLPILCERHTTSKLSAFEDLQSIKSMGFRGEALASMTYVA
HVTVSTITSGQLHGYRVSYRDGVMEHEPKACAAVKGTQVTIENLFYNMIARRKTLQNSAD
DYPKIVDLLCRFAIHHKNVSFSCRKHGAGAVDVHSVAMSTRLDAIRSVYGVSVARSLMKI
EASDANPSTSVFEMDGFISDSSYSAKKTTMVLFINERLVECTALKRAIEIIYAATLPKAS
KPFIYMSLILPPEHVDVNVHPTKREVSLLNQEVIIEKIQSVIELKLGNLNESSMYQEQQA
VDCSPVSSVSANKASCVNTSTSGSQKIPVNKMVRTDSQDPSGRMHAYLQVKPSRHHESSC
GLNSLRSSIRQRRNPKETADLTSVQELIDEFERDCHSGLLDTVRNCTYVGMADDDFALLQ
HNTHLYLANVVNLSKELMYQLVLQRFGYFNAIQLSEPAPLQELIMLALTEEDPDSEGIEN
DDLKVKIAQMNAKLLSEKSELLDEYFGIHVDPQANLSRLPVILDQYTPDMDRAPEFLLCL
GNDVTWNDEKVCFQTIAAALGNFYAMHPPLLPNPSSEGGSDFYKRQGKGNVSGGNDMVEE
GVDEELLSEAENAWAQREWSIQHVLFPSMRLFFKPPTSMATNGTFVQVASLEKLYKVFER
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagatgcagtccttcctcctccatcacaagacccaccaaggatccagcgtctt
gatgagtctgtagtcaaccgaattgcagctggtgaggtcatccaacgccccgttgcagcc
gtcaaggagctcgttgagaacagccttgatgcggggtccacctccatacatgttgttatt
aaggatggaggcctgaaactcattcaagtttctgatgatggccatggaatccgttatgat
gacttgccgattctatgtgagaggcatacaacatcaaagttgtctgcatttgaagattta
cagtcaattaagtcgatggggtttagaggagaagccttagcaagcatgacttatgttgct
catgttacagtctccaccataaccagcggtcagttgcatggttacagggtatcatacaga
gatggtgtgatggagcatgaacctaaggcgtgtgctgctgtaaaggggactcaagtaacg
attgagaatttattttataacatgattgcacgaaggaaaactctccagaactctgctgac
gattatccaaaaattgttgacctactttgtcggtttgctatccatcataaaaacgtgagc
ttctcctgcagaaagcatggagctggtgcagttgatgttcactcagttgctatgtctaca
aggctggatgctatcagatctgtgtatggggtctcagttgctcgcagtctgatgaagata
gaggcttcagatgctaatccatctacttcagtttttgaaatggatggctttatatccgat
tctagttactctgcaaagaagactaccatggttctcttcatcaatgaaagattagtcgaa
tgtactgctctgaagagggcaattgaaatcatctatgctgcaactttacccaaagcatca
aaacctttcatatatatgtcacttatcttgcctcctgagcatgttgatgttaacgtgcat
cccacaaagagagaggtgagccttttgaaccaggaggttattattgagaagatacaatct
gtgatagaattgaagctaggaaacttaaacgagtcaagcatgtatcaagaacaacaggca
gtggattgctctcctgttagttcagtatctgcaaacaaagcttcttgtgtaaatacatca
acatctgggtcgcaaaaaatacctgtaaataagatggtgcggacagattctcaggatcct
tctgggaggatgcatgcttatttgcaagttaagccttctagacaccatgaaagcagttgt
ggattgaattctttaaggtcttccatcagacagaggaggaatcccaaggaaactgctgat
cttacaagtgttcaggaacttatcgatgaatttgaacgtgattgtcactctggtcttttg
gacactgtaaggaactgcacgtatgttggtatggctgatgatgattttgctctccttcag
cataatactcatctctatcttgccaatgttgtaaatttgagcaaagagctcatgtatcaa
ctggttctgcaacgatttggttacttcaatgcaatacaattaagtgagcctgccccattg
caagaactaatcatgctggcactgactgaagaagatccggattcagaaggcattgagaat
gatgacttaaaagtaaagatagcccaaatgaatgctaagcttctaagtgagaaatctgaa
ttgctggatgaatattttggcattcatgtggatccacaagccaatttgtcaaggcttcct
gtcatacttgaccagtacacacctgacatggatcgggctccagaatttcttctttgtctg
ggaaatgatgtgacatggaatgatgagaaagtttgctttcaaaccattgctgctgctctt
ggaaacttctatgctatgcatccacctctattgccaaatccatcaagtgaaggaggttca
gatttttataaaagacaagggaaaggaaatgtttcaggagggaatgatatggtagaggaa
ggagttgatgaggagctactttcggaagcagagaatgcgtgggcccagcgagaatggtca
atacagcatgttctgtttccttccatgcggctcttcttcaagcccccaacttcaatggcc
acaaatggaacattcgtgcaggtggcctctttggagaagctatacaaggtttttgaaaga
tgctag
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