Lactuca sativa (garden lettuce): 111910221
Help
Entry
111910221 CDS
T05352
Name
(RefSeq) 26S proteasome regulatory subunit rpn11
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111910221
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsv01002
]
111910221
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111910221
03036 Chromosome and associated proteins [BR:
lsv03036
]
111910221
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111910221
Peptidases and inhibitors [BR:
lsv01002
]
Metallo peptidases
Family M67
111910221
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111910221
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
111910221
BRISC complex
111910221
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
111910221
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
111910221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
111910221
NCBI-ProteinID:
XP_023761780
LinkDB
All DBs
Position
5:284419848..284422847
Genome browser
AA seq
417 aa
AA seq
DB search
MSLTSVKMSEDVWLTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGALPQPRCDRQ
KDRVETNPEQLTAASVQAEKMTLETGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFNEDQYKVGRIQVTAFQSLDGKQNHVLKPHFSPINKSSIIDLESSLSSTE
NSLTHSGSTRVESLEYDTGDSKALKGGAKPSALKGFFANADTVNTESGIVDIDPMDMSES
MQEAMHRSNMEMSGAEYVRKEVPLHVLPTLSLLNLESPLTSFSHLQSVLYEEERTAYHQA
ILQIMRDGKAHPLSFIHHTSTYQASICKLMEYCLSPAITALQDRVTENEIRLRMLANEAK
ILEKESTRVNVNDSSSNSPRNVSSHGHRGSGKDLYNPFESNNVRSVSGSSSRSRKGS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaacgagtgtaaagatgtcggaggatgtgtggttaacatgtctcactcatgca
ttgtccacggagactgaagaaattatggggcttcttctcggcgatattcagcactccaaa
aatggaagtgtaactgccctaatttggggagcattgccacaaccaagatgtgataggcag
aaggatcgcgttgagacaaatcctgagcagctgacagctgcatcagttcaggctgagaaa
atgactctggaaactggaagaacaacaagagtgattggctggtatcattcacatccacat
atcacagtccttccttctcatgttgatgttcggactcaagctatgtatcaacttctagat
tctggttttataggattgattttttcgtgtttcaatgaagatcaatacaaggttggaaga
atacaagttacagcattccagtcattagatggaaagcaaaaccatgtattgaaacctcat
ttcagtcctataaataaaagttccattatagatctagaatcttccttaagttccacagag
aattcactcacacattctggctcaacacgtgtagaatctctagagtatgacactggtgat
tcaaaagctttaaagggtggagcaaaaccatctgctttgaagggtttctttgcaaatgca
gatactgtgaacacagaaagtggcatagttgatattgaccccatggatatgtctgaaagc
atgcaagaagcaatgcatcgttcaaatatggaaatgagtggtgcagagtatgtgagaaaa
gaagttcctcttcatgttttgccaactttgtcacttctgaatcttgaatcgcctttaaca
tcatttagtcatttacaatctgtgttatatgaagaggagcgaacagcatatcatcaagca
atattacaaattatgagggatggaaaagcccatccgctttctttcatccatcatacttcc
acttatcaagcttccatctgcaaattaatggaatattgcttaagccctgctataactgct
cttcaggatcgagtgacagaaaatgagattaggcttcggatgcttgcaaatgaagcgaaa
attttggaaaaagaaagcacaagagtgaatgtgaatgattcaagttcaaattcaccaaga
aatgtttcatctcatggacacagaggaagtgggaaggatttgtacaatccctttgaatca
aataatgtgagatctgtttctggttccagtagtcgtagtagaaaaggttcctag
DBGET
integrated database retrieval system
