Lactuca sativa (garden lettuce): 111910238
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Entry
111910238 CDS
T05352
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111910238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111910238
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
111910238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_25
AAA_16
AAA_29
AAA_28
AAA
AAA_33
RsgA_GTPase
TIP49
DnaB_C
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
111910238
NCBI-ProteinID:
XP_023761804
LinkDB
All DBs
Position
5:285369161..285380005
Genome browser
AA seq
1425 aa
AA seq
DB search
MDRSDIYRANSSRRVSSSRRLGSIRGSRSVRTGIDIFSKSTREESDEEALKWAALEKLPT
FDRLKKGLLFGSTGQTTEIDIDNLGVAERKQLLDRLVNAADEDNEQFLTRLRNRIDRVGI
ELPTIEVRYEHLTVEADINTGSRALPSFINFYLDIAEGFLSYFHVIRNTKRHITILDDVS
GVIKPGRMTLLLGPPSSGKTTLLLALAGRLGKGLQSTGKVTYNGHELHEFVPERTSAYIS
QNDVHIGVLTVRETLAFSARCQGVGSRYEMLAELSRREKSANVKPDPDIDIYMKAAAAEG
QEASVVTDYTLKILGLEECADTMVGDGMRRGISGGQRKRVTTGEIIVGPSNVLLMDEIST
GLDSSTTFQIVNSFKQYVHILEATALISLLQPAPETYNLFDDIVLLSDGQIVYQGPRENV
LEFFETMGFRCPERKGVADFLQEVTSKKDQEQYWTRRHDDYRFVTPKEFAQAYESFHVGQ
RLRNGLAIPYDKSKSHPAALTNKKFGLNKKELLKACVDREILLMKRHSFIYIFKITQLTI
MAVITMTVFLRTNMHRSGLEDGELYIGALFFGVTMIMFNGLAEIAMTIAKLPVFYRQRDF
QFYPTWAYAIPTWIIKIPISIVEAAIWTILTYYVIGFDPNFWRFLKHFLLLVVINQMASA
LFRLIAAAGRNLIVANTFGAFALLILFALGGFVLSRDQVKNWWIWGYWSSPMMYALNGIV
VNEFLGHKFNKPFGSSTLGRFIVTYEGLFAETYWYWIAFGALIGFMLIFNLCYVLCLQFL
DPYDKTQANATEHTESDVVPVELSSMATNGRNKNKKKGMILPFEPHCITFDNIKYSVNMP
QEMKEQGVSEDRLVLLKSLSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGLIEGDIR
ISGYPKKQETFARISGYCEQNDIHSPHVTVYESLIYSAWLRLAADVNENTRKMFVDEVME
LVELNPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR
TVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGKEIYVGPVGRNSCELIKYFEDIE
GVSKIKDGYNPATWMLEVSTSSQEQALGFDFSDIYKNSELYGRNKALIAELSEPRPGSSD
LHFTTQFSQPFFVQCRACLWKQRCSYWRNQPYTAVRFSFTTITALMLGSMFWDLGGKRDT
LQNLNDAMGCLYTSVLFLGIVYASSVQPVVDIERTVFYRERAAGMYSALPYAFAQVVVEI
PYIFSQAVVFGLIVYAMIGFDWTVVKFFWFMFIMFCCLLYMTYFGMMSVAVTPNTEIASV
VAAAFYGLWNLFSGYIIPEPKIPVWWRWYYWADPMAWTQYGLVVSQLGDFDSLLNNGETV
KEYLRHYYGFKHDFIGVVAGVHVGFVVIFAVIFSFCIKSFNFQKR
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagtgatatatatagagctaatagtagcagacgagttagtagtagcagacga
ttagggagcataagaggaagtcgcagtgtaagaacaggcattgatattttctcaaaatct
actcgtgaagaaagcgatgaagaagctcttaaatgggctgctcttgaaaaactacccacc
tttgaccgtttgaagaaaggtcttttgtttggatcaactggacaaacaacagagatcgat
attgataatcttggagttgcagagcgaaaacagttacttgatcggcttgttaatgctgca
gatgaagataatgagcagttcttgacgaggctcagaaatagaattgatagggttgggatt
gaattgccaacgattgaagtcagatatgagcatctgactgtggaggcggatattaataca
ggaagcagagctcttcctagttttatcaatttctaccttgatatcgcagagggtttcttg
agttattttcatgtgatacggaatacgaaaaggcatataactatccttgatgatgttagt
ggagtaattaaacctggcagaatgacattacttttgggtcctccaagttcggggaagaca
acgttgttgttagccttagctgggcgtcttggtaagggacttcagagcactggaaaggtg
acgtacaatggtcacgagttgcatgagtttgtacctgagagaacatctgcttatatcagt
caaaacgatgttcacattggagtattgactgttagagaaacattggctttctctgcccga
tgccaaggggttggatcacgttatgagatgttggctgaattgtcaagaagagaaaaaagc
gcaaacgttaaaccggatcctgatattgatatctatatgaaggctgctgcagcggaaggt
caagaagctagtgtcgtcacggattacactctcaagatattggggttagaggagtgtgca
gatacgatggtaggagatgggatgagaagaggtatatctggtggccaaagaaagcgtgtt
acaacaggtgaaattatcgttggaccttcgaatgttctcctaatggatgaaatatctact
ggtttggatagttcaacaacattccaaatagtgaattcttttaagcaatatgttcatatt
cttgaagccacagcgctcatatcacttctccaacctgcaccagagacatacaatttgttt
gatgacattgtgcttttgagcgatggacagatcgtgtatcagggtccacgtgaaaatgtg
cttgagttttttgaaactatggggttccgctgccctgagaggaaaggtgttgctgatttc
ctgcaagaagtgacatcaaagaaagatcaggaacaatattggacaagaagacacgatgat
tatagatttgtgacaccaaaggaatttgctcaagcatatgaatcatttcatgtaggacaa
cgcctaagaaacggacttgcaatcccgtatgacaaaagcaaaagccatcctgcagctctt
acaaacaagaagtttggtttaaacaagaaggagctcttgaaagcttgtgtcgatagagaa
atattgctcatgaaaagacactcattcatctacattttcaaaataacacaactaactatt
atggcggttatcaccatgactgtgtttctccgaactaacatgcatagatctgggctcgaa
gatggagaactatacattggtgctttgttctttggtgtcacaatgatcatgtttaatggg
ttggctgagattgctatgacgattgcaaagctcccagtattctacaggcaacgggatttc
caattctatccgacatgggcgtatgctattccaacttggattataaagattccgatttcg
attgtggaagccgcgatttggacaatactcacttactatgtaataggatttgatcccaac
ttttggagatttctcaagcatttcttactgctcgtggtcattaaccagatggcttctgca
ttatttcgattgatcgcggccgcaggccgcaacttgattgttgcaaacacatttggtgca
tttgcactccttattctctttgctttgggtggattcgtcttatcacgagaccaagtaaaa
aattggtggatttggggatactggtcatcaccaatgatgtatgctctgaatggaatcgtg
gtaaatgagtttctcggacataagtttaacaagcctttcggcagttcaacactggggaga
tttatcgttacttatgaaggattgttcgcggaaacttactggtattggattgcatttggg
gctctgattgggttcatgttaatcttcaatttgtgttacgtgctgtgtttacaatttctt
gacccttatgataaaacccaagcaaatgcaacagaacacacagaaagtgatgtggtaccc
gttgagttatcgtccatggccacaaacggcagaaataaaaacaagaaaaaaggaatgata
cttccattcgaaccacattgtatcacgtttgataatatcaagtactccgttaatatgcca
caggaaatgaaagagcaaggtgttagtgaagatcgattggtgttgctcaagagtttgagt
ggagcttttcgacctggtgttcttaccgcgctaatgggggttagtggtgctggtaaaact
acgcttatggacgttcttgcaggtagaaaaacaggaggactaatagaaggtgacatccga
atatctgggtatccaaagaaacaagaaacatttgctcggatttcagggtattgtgaacaa
aacgacatccattctcctcatgttacagtttatgaatctttgatctactcggcatggcta
cggttggcagctgatgttaacgaaaacaccagaaagatgtttgttgatgaggtgatggaa
cttgtggaactgaatccattgagagatgcattagtagggttgccgggggtcaacgggcta
tcaactgaacagagaaagcggttaaccatagcagttgagctggtggctaacccatctata
atatttatggatgaaccaacttccggtcttgatgctagagcggctgctattgtgatgaga
actgttaggaacacggtggacacggggagaacagttgtgtgtacaattcatcagccaagc
attgatatatttgaagcttttgatgagttattcttaatgaaaagaggaggaaaggagata
tatgttggacccgttggtcgtaactcttgcgaattgatcaagtactttgaggatattgag
ggggttagtaaaattaaagatggttataaccctgcaacttggatgttggaagtcagtact
tcgtcccaagaacaagctttgggattcgatttcagtgacatctacaagaattcggaactt
tatgggagaaacaaagctcttattgccgaactaagtgaaccacgccctggttccagcgac
cttcatttcactactcaattctcgcagccgttcttcgttcaatgtcgtgcatgtctatgg
aaacaacgatgctcatattggaggaaccagccttacactgctgttcgtttctccttcacc
accatcactgcactcatgctgggatctatgttctgggatcttggaggtaaaagggacacc
ttgcaaaatttgaatgacgcgatgggttgtctctatacatcggttctcttcttaggaatc
gtatacgcatcctcggtgcagcctgtggtggacatagaacgaactgtgttttatagagaa
cgagctgctggaatgtattctgcattgccgtatgcttttgctcaggttgttgtggaaatc
ccctatatcttttcccaagctgtggttttcgggcttatagtgtatgcaatgattggattt
gattggacggttgtaaaattcttttggttcatgttcatcatgttctgttgcttgctctac
atgacatacttcggtatgatgtcggtcgcagtcacaccgaatacggagatcgcttccgtt
gttgctgctgcgttttatgggctctggaatctcttctcgggatacatcatcccagaacct
aaaattccggtgtggtggagatggtactactgggcagatccgatggcatggacacaatac
ggtctggttgtttcgcagttaggggactttgacagcctgctcaacaatggggagacagtg
aaggagtacttgcgtcattattatggatttaaacacgacttcattggtgttgtggcgggt
gttcatgtgggattcgtggttatttttgcagttatattttcattttgtatcaagtccttc
aatttccaaaagagatag
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