Lactuca sativa (garden lettuce): 111910256
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Entry
111910256 CDS
T05352
Name
(RefSeq) coatomer subunit beta'-2
KO
K17302
coatomer subunit beta'
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111910256
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111910256
Membrane trafficking [BR:
lsv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111910256
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111910256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR19_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
WD40_like
TPR_GEMI5
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WD_LRWD1
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
111910256
NCBI-ProteinID:
XP_023761828
LinkDB
All DBs
Position
5:complement(287137400..287144289)
Genome browser
AA seq
901 aa
AA seq
DB search
MPLRLDIKRKLAQRSERVKSVDLHPTEPWILTSLYSGTVCIWDYQSQTMAKSFEVTELPV
RSAKFIARKQWVVAGADDMYIRVYNYNTMDKVKVYEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKNWLCTQIFEGHSHYVMQVTINPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGCMKGSRRVVIGYDEGTIMVKIG
REEPVVSMDNSGKIIWSKHNEIQTVNIKSVGADHEVSDGERLPLGVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTDGEYAVRESTSKIKIFNKSFQ
EKKSIRPTFSAERIYGGSLLAMCSNDFICFYDWSECRLIQRIDVNVKNLYWADSGDLVAI
SSDSLFYVLKYNRDVVSAHLDSGRPVDDQGIEDSFELLFEVNEKVRTGLWVGDCFIYTNA
SWRLNYCVGGEVNTMFHLDRPMYLLGYLANQSRVYLIDKEFNVVGYTLLLTLIEYKTLVM
RGDIERANGVLPSIPKEHYNSVAHFLESRGKVEEALEVATDPDYRFELAIQLGKLDIAKD
IALVVESESKWKQLGELAMSAGLLDMAEDCLKHANDLSGLLLLYSSLGDAEEISKLASLA
KENGKNNVAFACLFMLGKLEDCLQLLIDSNRIPEAALMARSYLPSKVSEIVALWRKDLNK
VNQKAAESLADPQEYPNMFEDWQIALEVEEKAAETRGSYPPAVEYVNYVDRSHMNLVETF
KNMQLDVDEPLENGGLDHENGTEDEFVDGEEGGVGMDNDSTDGAVLVNGNDADQDQDQDK
E
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctcgatatcaagaggaagcttgctcaaagatcagaaagagtaaaatcg
gtggacctgcatcctacggaaccatggattctcacaagtttgtattcaggaacagtctgc
atatgggattaccagtctcagactatggcaaaatcgtttgaggttactgagttaccagtc
agatcagcaaagttcatagcacgcaagcagtgggttgttgcaggtgcagatgacatgtat
atccgggtatacaattacaatacaatggataaagtcaaagtatatgaggcacatacagat
tatattagatgtgttgctgttcaccccaccctcccatatgtattatcatcatctgatgac
atgcttataaaactttgggattgggaaaagaactggctttgtactcaaatttttgagggc
cattcccattatgtgatgcaagtgacaatcaatccaaaagacaccaacacttttgcaagt
gcatcccttgatcgtaccataaagatttggaatcttggctcacctgatcctaacttcaca
cttgatgcacatctcaaaggagtgaattgtgtggattattttactgggggcgataaacct
tatctaattactggatcagatgatcacactgctaaggtgtgggattatcaaaccaaaagt
tgtgtccagactttagaaggtcacacacacaatgtttctgctgtatgcttccatcctgaa
ctcccaataattattacaggttctgaggatggtactgtacgtatatggcactccaccact
tatagactagagaacacattgaattatggacttgaaagggtctgggctgttgggtgcatg
aaaggttcacgaagggttgttattggatatgatgaaggaaccataatggtgaaaattggt
cgtgaggagcctgtagttagcatggacaatagtggaaaaattatatggtctaagcataat
gagatccagactgttaacatcaaaagcgtgggtgctgatcatgaggtttctgatggagag
aggttacctttaggagttaaagagttgggaacatgtgatctctacccacaaagcttgaag
cacaatccaaatgggaggtttgtggttgtatgtggtgatggtgaatacattatatataca
gctttagcatggagaaatagatcctttggttctgctttggaatttgtttggtcaacagat
ggtgagtatgctgttagagagagcacatctaaaatcaagatttttaacaaatctttccag
gaaaagaagagtatcaggccgacattttcagctgagcgaatatatggaggatctttgctg
gcaatgtgctcaaatgattttatatgtttttatgattggtctgagtgcagattgattcaa
cggattgatgttaatgtcaaaaacctatactgggctgatagtggtgatttggtggcaatt
tccagtgattcattattctacgtgctaaaatataatcgtgatgtagtatcagcacatctg
gatagtggaagacctgtagatgatcaaggaattgaagattcctttgaacttctatttgaa
gtaaatgaaaaagttagaactggattatgggttggagactgttttatatacactaatgct
tcatggagactcaactattgtgttggtggcgaggttaacacaatgttccatttggatcga
cctatgtatcttcttgggtatcttgctaatcagagcagggtttatctcattgacaaagaa
ttcaatgtcgttggatacactttgcttctgacgttaatcgagtacaagacacttgtgatg
cgtggagacatagaacgagctaatggagttttaccctcaatcccaaaggagcattataat
agtgttgctcattttctggagtcacggggcaaggttgaagaggccttggaagttgctaca
gaccctgattatagatttgagttggccattcagcttggtaaacttgacattgccaaggac
attgcactagtagtagagagcgagtcaaaatggaagcaattgggtgaattagccatgtct
gctggattgttggacatggcagaggattgtttgaaacatgcaaacgatttgagtggttta
ttacttctttactcttctttaggagatgctgaagagatttcaaaacttgcatctcttgct
aaagaaaacggaaaaaacaacgttgcattcgcttgtctctttatgttgggcaaattagaa
gactgtttacagctgttaattgacagcaatcggatacctgaagctgctctgatggcacga
tcttatcttcccagcaaggtttcagagatagtcgccctttggagaaaagaccttaacaag
gttaaccagaaagctgcagaatctttagcggatcctcaagagtacccgaatatgtttgag
gactggcaaattgcacttgaggtcgaagaaaaggctgcagagacaaggggtagttatcct
ccagcagtggagtatgtgaactatgttgatagatcacatatgaatctagtggagactttt
aaaaacatgcaattggatgttgatgaaccattggaaaatggaggcttagatcatgagaat
ggaacggaggatgaatttgttgatggtgaagaaggtggtgtgggcatggataatgattct
acagatggtgctgtacttgttaatggaaacgatgctgaccaagaccaagaccaagacaaa
gagtga
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